RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 EFL1Q7Z2Z2 1120 aaKnown RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 SRLQ86TD4 932 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 VPS36Q86VN1 386 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 GKN2Q86XP6 184 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 LRRC49Q8IUZ0 686 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 SPACA3Q8IXA5 215 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 ARL14Q8N4G2 192 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 OR6K2Q8NGY2 324 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 WDR36Q8NI36 951 aaKnown RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 BBC3Q96PG8 261 aaPredicted RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 PSKH2Q96QS6 385 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 APOOQ9BUR5 198 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 SLC39A8Q9C0K1 460 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 CLPBQ9H078 707 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 ISCUQ9H1K1 167 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 ATP13A3Q9H7F0 1226 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 MBNL1Q9NR56 388 aaKnown RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 SEPT11Q9NVA2 429 aaKnown RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 LHX3Q9UBR4 397 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 GGT7Q9UJ14 662 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 PADI4Q9UM07 663 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 ATP8A1Q9Y2Q0 1164 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 PCDHB1Q9Y5F3 818 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 ENTPD2Q9Y5L3 495 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 BZW2Q9Y6E2 419 aaKnown RBP7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 MYLKQ15746 1914 aa7.85□□□□□ -1.15
PTCSC3-201ENST00000556013 BAHCC1Q9P281 2608 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 CPED1A4D0V7 1026 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 J3KR12 359 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 EEF2KO00418 725 aaKnown RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 TRAFD1O14545 582 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 DAPK3O43293 454 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 PRPSAP2O60256 369 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 BUB1BO60566 1050 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 FTLP02792 175 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 C6P13671 934 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ERCC2P18074 760 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 PSMA2P25787 234 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 TEAD1P28347 426 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LIG3P49916 1009 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 PAPOLAP51003 745 aaKnown RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 AP1S1P61966 158 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 GABREP78334 506 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 OGDHQ02218 1023 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 BCL2L1Q07817 233 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 PEX6Q13608 980 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 INPP5AQ14642 412 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 NFATC4Q14934 902 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 CDKN3Q16667 212 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 CLPPQ16740 277 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 DEFB133Q30KQ1 61 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 TPRG1LQ5T0D9 272 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 CFAP58Q5T655 872 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 GUSBP11Q6P575 273 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ENPP7Q6UWV6 458 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 XKR5Q6UX68 686 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LIPIQ6XZB0 460 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 RFX8Q6ZV50 586 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 NLRP8Q86W28 1048 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 SLC35F3Q8IY50 421 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 RAVER1Q8IY67 606 aaKnown RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 CBARPQ8N350 705 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 BBS5Q8N3I7 341 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ARFGAP1Q8N6T3 406 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ARL10Q8N8L6 244 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 SLC39A7Q92504 469 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 TMEM159Q96B96 161 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 IQCDQ96DY2 449 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LIN37Q96GY3 246 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 FCRL3Q96P31 734 aaPredicted RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 RBM15Q96T37 977 aaKnown RBP eCLIP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LGMNQ99538 433 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LRRC61Q9BV99 259 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 B3GNT4Q9C0J1 378 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 DHX35Q9H5Z1 703 aaKnown RBP7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ZWILCHQ9H900 591 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 PCDH12Q9NPG4 1184 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ASCL3Q9NQ33 180 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 APPL1Q9UKG1 709 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 AP4E1Q9UPM8 1137 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 DOLKQ9UPQ8 538 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 ITM2BQ9Y287 266 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 RAI2Q9Y5P3 530 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 SCINQ9Y6U3 715 aa7.84□□□□□ -1.15
PTCSC3-201ENST00000556013 LOC400499M0QZD8 3231 aa7.84□□□□□ -1.16
PTCSC3-201ENST00000556013 NBEAQ8NFP9 2946 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 RP1P56715 2156 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 SHROOM3Q8TF72 1996 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CCDC187A0A096LP49 1063 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 A0A1B0GTH6 734 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CDRT15L2A8MXV6 281 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 PSMD11O00231 422 aa7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 CACNB4O00305 520 aaPredicted RBP7.83□□□□□ -1.16
PTCSC3-201ENST00000556013 INSIG1O15503 277 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms