RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 DPYSL3Q14195 570 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 LRRC14Q15048 493 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 ZNF548Q8NEK5 533 aaPredicted RBP18.54■□□□□ 0.56
NEDD1-208ENST00000555806 ECHDC3Q96DC8 303 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 NHEJ1Q9H9Q4 299 aaPredicted RBP18.54■□□□□ 0.56
NEDD1-208ENST00000555806 SCUBE2Q9NQ36 999 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 SPTLC3Q9NUV7 552 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 NLGN3Q9NZ94 848 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 SPEGQ15772 3267 aa18.54■□□□□ 0.56
NEDD1-208ENST00000555806 SCAMP1O15126 338 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 MFSD11O43934 449 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 NEBLO76041 1014 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 PEX11BO96011 259 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 KRT7P08729 469 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 IL4RP24394 825 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 HNF1BP35680 557 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 MMP13P45452 471 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 ARSEP51690 589 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 CLDN6P56747 220 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 TAS2R40P59535 323 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 YPEL5P62699 121 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 POLR2LP62875 67 aaKnown RBP18.53■□□□□ 0.56
NEDD1-208ENST00000555806 EIF2B5Q13144 721 aaKnown RBP18.53■□□□□ 0.56
NEDD1-208ENST00000555806 ILKQ13418 452 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 MESDQ14696 234 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 MARC1Q5VT66 337 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 TMPRSS12Q86WS5 348 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 CNGA4Q8IV77 575 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 MAP7D3Q8IWC1 876 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 PDCD6IPQ8WUM4 868 aaKnown RBP18.53■□□□□ 0.56
NEDD1-208ENST00000555806 ZNF670Q9BS34 389 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 DUSP23Q9BVJ7 150 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 KLF15Q9UIH9 416 aa18.53■□□□□ 0.56
NEDD1-208ENST00000555806 SHROOM3Q8TF72 1996 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 TRAFD1O14545 582 aaPredicted RBP18.52■□□□□ 0.56
NEDD1-208ENST00000555806 TOR1BO14657 336 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 PCCBP05166 539 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 ELFN1P0C7U0 828 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 JUPP14923 745 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 ACP1P24666 158 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 MAN1A1P33908 653 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 MAXP61244 160 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 PDK2Q15119 407 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 WSCD2Q2TBF2 565 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 ANKRD20A8PQ5CZ79 823 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 HES3Q5TGS1 186 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 NCBP2-AS2Q69YL0 99 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 MACC1Q6ZN28 852 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 RBFAQ8N0V3 343 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 PGBD5Q8N414 524 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 LMX1AQ8TE12 382 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 BTN2A2Q8WVV5 523 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 NSMCE3Q96MG7 304 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 NUDCD1Q96RS6 583 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 MGME1Q9BQP7 344 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 CCDC86Q9H6F5 360 aaKnown RBP18.52■□□□□ 0.56
NEDD1-208ENST00000555806 NT5MQ9NPB1 228 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 APOBEC3BQ9UH17 382 aaKnown RBP18.52■□□□□ 0.56
NEDD1-208ENST00000555806 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.56
NEDD1-208ENST00000555806 LRRK1Q38SD2 2015 aa18.52■□□□□ 0.55
NEDD1-208ENST00000555806 ARID1BQ8NFD5 2236 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-208ENST00000555806 A8MX80 341 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 AKR1B15C9JRZ8 316 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-208ENST00000555806 K7ESM1 405 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 AQP9O43315 295 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 SOCS5O75159 536 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 MAP3K6O95382 1288 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 GIMD1P0DJR0 217 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 CR2P20023 1033 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 RALGDSQ12967 914 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 FAXCQ5TGI0 409 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 DPPA4Q7L190 304 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 LRRC49Q8IUZ0 686 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 PHACTR4Q8IZ21 702 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 PCDH19Q8TAB3 1148 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 SLC35G2Q8TBE7 412 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 MDM1Q8TC05 714 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 APOLD1Q96LR9 279 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 SLC13A1Q9BZW2 595 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 NOD2Q9HC29 1040 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 EVA1BQ9NVM1 165 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 SPASTQ9UBP0 616 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 ASPMQ8IZT6 3477 aa18.51■□□□□ 0.55
NEDD1-208ENST00000555806 A0A1W2PQ67 120 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 CFAP69A5D8W1 941 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 SRRM3A6NNA2 597 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-208ENST00000555806 CPP00450 1065 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 CKMT1AP12532 417 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 MYF5P13349 255 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 HTR1BP28222 390 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 GARSP41250 739 aaKnown RBP18.5■□□□□ 0.55
NEDD1-208ENST00000555806 ITKQ08881 620 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 GALNT2Q10471 571 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 INPP5AQ14642 412 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 PAFAH1B3Q15102 231 aaKnown RBP18.5■□□□□ 0.55
NEDD1-208ENST00000555806 DEFB133Q30KQ1 61 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
NEDD1-208ENST00000555806 LIPIQ6XZB0 460 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms