RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PRLP01236 227 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PRKCGP05129 697 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PDHA1P08559 390 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PIRTP0C851 137 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PAMP19021 973 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 GRIA2P42262 883 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 MSH2P43246 934 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 GALK1P51570 392 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 GRM3Q14832 879 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 EFTUD2Q15029 972 aaKnown RBP eCLIP9.72□□□□□ -0.854e-7■■■■■ 38.8
HNRNPC-220ENST00000555585 SMAD1Q15797 465 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 QPCTQ16769 361 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PTPRNQ16849 979 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 KBTBD12Q3ZCT8 623 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 LEXMQ3ZCV2 418 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 HABP4Q5JVS0 413 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 TSTD2Q5T7W7 516 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 TRMT10BQ6PF06 316 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 DPY19L3Q6ZPD9 716 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 TMEM135Q86UB9 458 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 RASSF3Q86WH2 238 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 SFTPA1Q8IWL2 248 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 SLC44A3Q8N4M1 653 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PPM1NQ8N819 430 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 ZNF366Q8N895 744 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 FRS2Q8WU20 508 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 CDKL2Q92772 493 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 ARL8AQ96BM9 186 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 MFSD3Q96ES6 412 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 TUBGCP5Q96RT8 1024 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 HEPHQ9BQS7 1158 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 MTG2Q9H4K7 406 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 KCNK12Q9HB15 430 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 PLAC1Q9HBJ0 212 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 MRM3Q9HC36 420 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 C20orf96Q9NUD7 363 aaPredicted RBP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 SLC24A2Q9UI40 661 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 FAM50BQ9Y247 325 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 IKBKGQ9Y6K9 419 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 FAM169AQ9Y6X4 670 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 LAMA3Q16787 3333 aa9.72□□□□□ -0.85
HNRNPC-220ENST00000555585 ANKRD66B4E2M5 251 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 H3BQF6 201 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 FZD6O60353 706 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 TCEA3O75764 348 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 PIAS1O75925 651 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 CRTAMO95727 393 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SLC4A1P02730 911 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 UGT2B4P06133 528 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ASGR2P07307 311 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 INHBAP08476 426 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 HLA-EP13747 358 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 CTPS1P17812 591 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 PRKCHP24723 683 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 OAS2P29728 719 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SLC8A1P32418 973 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ABL2P42684 1182 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 GRIA4P48058 902 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 MGAT5Q09328 741 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 DSG2Q14126 1118 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ZNF234Q14588 700 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 TMED2Q15363 201 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SMAD2Q15796 467 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 AGBL2Q5U5Z8 902 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ARMC3Q5W041 872 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 KCTD16Q68DU8 428 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ESRP1Q6NXG1 681 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SERPINA13PQ6UXR4 307 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 GDPD4Q6W3E5 623 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 NLRP9Q7RTR0 991 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 GLT6D1Q7Z4J2 308 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 UNC5BQ8IZJ1 945 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 NDUFAF2Q8N183 169 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 RIBC1Q8N443 379 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 OR2A12Q8NGT7 310 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 GRIN3AQ8TCU5 1115 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 BRSK1Q8TDC3 778 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 CERS2Q96G23 380 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 ZNF778Q96MU6 729 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 KLHL32Q96NJ5 620 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SMIM14Q96QK8 99 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 PAFAH2Q99487 392 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 P2RY13Q9BPV8 354 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 PPCSQ9HAB8 311 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 FAM53CQ9NYF3 392 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 MOCS1Q9NZB8 636 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 OGFRQ9NZT2 677 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 VPS18Q9P253 973 aa9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 PSMC3IPQ9P2W1 217 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-220ENST00000555585 CTNNAL1Q9UBT7 734 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms