RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RUNDC3AQ59EK9 446 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 ARHGAP17Q68EM7 881 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 FAM122CQ6P4D5 195 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 NFE4Q86UQ8 179 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 DENND6AQ8IWF6 608 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 CCDC105Q8IYK2 499 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 SRBD1Q8N5C6 995 aaKnown RBP3.01□□□□□ -1.93
SRP54-207ENST00000555535 FSIP1Q8NA03 581 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 HCAR2Q8TDS4 363 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 FIG4Q92562 907 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 TNIP3Q96KP6 325 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 TMLHEQ9NVH6 421 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 ZNF224Q9NZL3 707 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 SLCO3A1Q9UIG8 710 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 KCNK7Q9Y2U2 307 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 AGRNO00468 2067 aa3□□□□□ -1.93
SRP54-207ENST00000555535 CGNL1Q0VF96 1302 aa3□□□□□ -1.93
SRP54-207ENST00000555535 A8MU10 97 aa3□□□□□ -1.93
SRP54-207ENST00000555535 H0Y3Z8 333 aa3□□□□□ -1.93
SRP54-207ENST00000555535 METTL18O95568 372 aa3□□□□□ -1.93
SRP54-207ENST00000555535 DHRS4L1P0CG22 281 aa3□□□□□ -1.93
SRP54-207ENST00000555535 CD53P19397 219 aa3□□□□□ -1.93
SRP54-207ENST00000555535 PIGAP37287 484 aa3□□□□□ -1.93
SRP54-207ENST00000555535 BTKQ06187 659 aa3□□□□□ -1.93
SRP54-207ENST00000555535 SMAD1Q15797 465 aaKnown RBP3□□□□□ -1.93
SRP54-207ENST00000555535 DCAF6Q58WW2 860 aa3□□□□□ -1.93
SRP54-207ENST00000555535 FAAP20Q6NZ36 180 aa3□□□□□ -1.93
SRP54-207ENST00000555535 CSGALNACT1Q8TDX6 532 aa3□□□□□ -1.93
SRP54-207ENST00000555535 FAM222BQ8WU58 562 aa3□□□□□ -1.93
SRP54-207ENST00000555535 RNF183Q96D59 192 aa3□□□□□ -1.93
SRP54-207ENST00000555535 KTI12Q96EK9 354 aaPredicted RBP3□□□□□ -1.93
SRP54-207ENST00000555535 C3orf30Q96M34 536 aa3□□□□□ -1.93
SRP54-207ENST00000555535 CTDSP1Q9GZU7 261 aa3□□□□□ -1.93
SRP54-207ENST00000555535 ABCF3Q9NUQ8 709 aa3□□□□□ -1.93
SRP54-207ENST00000555535 FAM120CQ9NX05 1096 aaKnown RBP3□□□□□ -1.93
SRP54-207ENST00000555535 KCNS2Q9ULS6 477 aa3□□□□□ -1.93
SRP54-207ENST00000555535 COL5A2P05997 1499 aaPredicted RBP3□□□□□ -1.93
SRP54-207ENST00000555535 SHROOM4Q9ULL8 1493 aa3□□□□□ -1.93
SRP54-207ENST00000555535 GREB1LQ9C091 1923 aaPredicted RBP2.99□□□□□ -1.93
SRP54-207ENST00000555535 A0A0G2JPF8 293 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.99□□□□□ -1.93
SRP54-207ENST00000555535 HNRNPCL3B7ZW38 293 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 E7EVH7 732 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ACKR2O00590 384 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 MID1O15344 667 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 HNRNPCL1O60812 293 aaKnown RBP2.99□□□□□ -1.93
SRP54-207ENST00000555535 ADAP00813 363 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 SERPINC1P01008 464 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 HNRNPCL4P0DMR1 293 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ARSFP54793 590 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 IRX1P78414 480 aaPredicted RBP2.99□□□□□ -1.93
SRP54-207ENST00000555535 EFNB3Q15768 340 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 PAPPA-AS1Q5QFB9 102 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 GJB7Q6PEY0 223 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 RINLQ6ZS11 566 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ZC3HC1Q86WB0 502 aaKnown RBP2.99□□□□□ -1.93
SRP54-207ENST00000555535 LINS1Q8NG48 757 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 CREB3L4Q8TEY5 395 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 NCSTNQ92542 709 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 TANKQ92844 425 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ARNT2Q9HBZ2 717 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ARFGAP3Q9NP61 516 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 NLRC4Q9NPP4 1024 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 ANKRD10Q9NXR5 420 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 PAK5Q9P286 719 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 SIX4Q9UIU6 781 aa2.99□□□□□ -1.93
SRP54-207ENST00000555535 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 PCDH7O60245 1069 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 SKAP2O75563 359 aaPredicted RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 KRT38O76015 456 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 CHAF1AQ13111 956 aaPredicted RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 PUM3Q15397 648 aaKnown RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 OASLQ15646 514 aaKnown RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 PGBD2Q6P3X8 592 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 SHFQ7M4L6 423 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 DSG4Q86SJ6 1040 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 ZMIZ2Q8NF64 920 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 TTC14Q96N46 770 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 TRIM15Q9C019 465 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 WDR12Q9GZL7 423 aaKnown RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 RPS10P5Q9NQ39 176 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 G6PC2Q9NQR9 355 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 SPATS2LQ9NUQ6 558 aaKnown RBP2.98□□□□□ -1.93
SRP54-207ENST00000555535 TAAR2Q9P1P5 351 aa2.98□□□□□ -1.93
SRP54-207ENST00000555535 ADGRF5Q8IZF2 1346 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 MEIOCA2RUB1 952 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 WNT9BO14905 357 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 DHX16O60231 1041 aaKnown RBP2.97□□□□□ -1.93
SRP54-207ENST00000555535 ZIC3O60481 467 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 RGS11O94810 467 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 SERPINB3P29508 390 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 RBM5P52756 815 aaKnown RBP eCLIP2.97□□□□□ -1.93
SRP54-207ENST00000555535 PRKAA2P54646 552 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 SLC20A2Q08357 652 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 TANGO2Q6ICL3 276 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 SLC9B2Q86UD5 537 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 SFTPA2Q8IWL1 248 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 ERGIC1Q969X5 290 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 ZNF689Q96CS4 500 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms