RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 WSCD2Q2TBF2 565 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 NYAP1Q6ZVC0 841 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 PTAR1Q7Z6K3 402 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 SLCO6A1Q86UG4 719 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 PNPLA1Q8N8W4 532 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 TP53I13Q8NBR0 393 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 CXorf40AQ8TE69 158 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 RHBDD1Q8TEB9 315 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 ASB12Q8WXK4 309 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 SKA1Q96BD8 255 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 DESI2Q9BSY9 194 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 ERVMER34-1Q9H9K5 563 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 SAE1Q9UBE0 346 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 TRIM10Q9UDY6 481 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 KLF15Q9UIH9 416 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 PNMA8BQ9ULN7 279 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 HEY1Q9Y5J3 304 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 HS3ST3A1Q9Y663 406 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 KCNK1O00180 336 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 DFNA5O60443 496 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 TM7SF2O76062 418 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 HLA-DQB2P05538 268 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 PDHA1P08559 390 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 ATXN1LP0C7T5 689 aaKnown RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 CCNB1P14635 433 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 CCNCP24863 283 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 HSPA9P38646 679 aaKnown RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 LIG3P49916 1009 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 PFN3P60673 137 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 FOXC1Q12948 553 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 ZBTB17Q13105 803 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 HNRNPDQ14103 355 aaKnown RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 IRF4Q15306 451 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 CNTD1Q8N815 330 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 CCNYQ8ND76 341 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 ARRDC2Q8TBH0 407 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 PDCD6IPQ8WUM4 868 aaKnown RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 FUBP1Q96AE4 644 aaKnown RBP13.76□□□□□ -0.21
SNX6-203ENST00000555416 HDAC11Q96DB2 347 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 HERPUD2Q9BSE4 406 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 RBM22Q9NW64 420 aaKnown RBP eCLIP13.76□□□□□ -0.216e-10■■□□□ 12.5
SNX6-203ENST00000555416 UCKL1Q9NWZ5 548 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 B4GALT6Q9UBX8 382 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
SNX6-203ENST00000555416 TDRD6O60522 2096 aaKnown RBP13.75□□□□□ -0.21
SNX6-203ENST00000555416 CHD8Q9HCK8 2581 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 APOL1O14791 398 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 PSTPIP1O43586 416 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
SNX6-203ENST00000555416 SUOXP51687 545 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 ELP6Q0PNE2 266 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 SUZ12Q15022 739 aaKnown RBP13.75□□□□□ -0.21
SNX6-203ENST00000555416 CFAP58Q5T655 872 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 ALG1LQ6GMV1 187 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 LIPIQ6XZB0 460 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 DAAM2Q86T65 1068 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 VSIG1Q86XK7 387 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 PELI3Q8N2H9 469 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 SLC25A45Q8N413 288 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 EID2Q8N6I1 236 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 NSMCE1Q8WV22 266 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 FATE1Q969F0 183 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 OLFM3Q96PB7 478 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 CEP41Q9BYV8 373 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 DDX56Q9NY93 547 aaKnown RBP13.75□□□□□ -0.21
SNX6-203ENST00000555416 IMPACTQ9P2X3 320 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 FRYQ5TBA9 3013 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 CEP295Q9C0D2 2601 aa13.75□□□□□ -0.21
SNX6-203ENST00000555416 SPTY2D1-AS1A0A0U1RR47 76 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 FPGTO14772 594 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 PJA2O43164 708 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 SOCS5O75159 536 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 PGLSO95336 258 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 CPP00450 1065 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 PRLP01236 227 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 JCHAINP01591 159 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 ITGAVP06756 1048 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 MMP2P08253 660 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 GIMD1P0DJR0 217 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms