RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 STN1Q9H668 368 aaKnown RBP5.52□□□□□ -1.53
VRK1-203ENST00000555067 VEZTQ9HBM0 779 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.52□□□□□ -1.53
VRK1-203ENST00000555067 MTRRQ9UBK8 725 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 TNFSF13BQ9Y275 285 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 INSL5Q9Y5Q6 135 aa5.52□□□□□ -1.53
VRK1-203ENST00000555067 A0A1W2PQ09 198 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 ADAM20O43506 726 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 TBX10O75333 385 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 GUCY1B2O75343 617 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 GCH1P30793 250 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 UBXN2AP68543 259 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 PMPCAQ10713 525 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 AIMP1Q12904 312 aaKnown RBP5.51□□□□□ -1.53
VRK1-203ENST00000555067 GALNT3Q14435 633 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 ALG10Q5BKT4 473 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 ALG10BQ5I7T1 473 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 CBWD5Q5RIA9 395 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 C10orf76Q5T2E6 689 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 TRILQ7L0X0 811 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 TRABD2AQ86V40 505 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 EXD3Q8N9H8 876 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 ZCCHC10Q8TBK6 192 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 PERPQ96FX8 193 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 DCLK3Q9C098 648 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 XPO4Q9C0E2 1151 aaKnown RBP5.51□□□□□ -1.53
VRK1-203ENST00000555067 TTYH1Q9H313 450 aaPredicted RBP5.51□□□□□ -1.53
VRK1-203ENST00000555067 PLAC1Q9HBJ0 212 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 LIN7CQ9NUP9 197 aaKnown RBP5.51□□□□□ -1.53
VRK1-203ENST00000555067 TXLNGQ9NUQ3 528 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 MORF4L1Q9UBU8 362 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 SLC25A10Q9UBX3 287 aaPredicted RBP5.51□□□□□ -1.53
VRK1-203ENST00000555067 GTF3C4Q9UKN8 822 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 NFU1Q9UMS0 254 aa5.51□□□□□ -1.53
VRK1-203ENST00000555067 LOC105369274A0A096LPK9 316 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 LOC102723532A0A0G2JNH3 316 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 PI4K2BG5E9Z4 385 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 H0Y626 953 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 HTATSF1O43719 755 aaKnown RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 NEURL1O76050 574 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 LARGE1O95461 756 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 IGHDP01880 384 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 PTMAP06454 111 aaKnown RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 SPARCP09486 303 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 ALDOCP09972 364 aaKnown RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 RARGP13631 454 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 ICAM3P32942 547 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 PSMB10P40306 273 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 GARSP41250 739 aaKnown RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 MSH2P43246 934 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 TMF1P82094 1093 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 SHC2P98077 582 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 MED22Q15528 200 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 KYNUQ16719 465 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 NADSYN1Q6IA69 706 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 CYP20A1Q6UW02 462 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 SLFN11Q7Z7L1 901 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 GPSM1Q86YR5 675 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 OR4N4Q8N0Y3 316 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 FSIP1Q8NA03 581 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 SCFD2Q8WU76 684 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 JAKMIP2Q96AA8 810 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 PKNOX2Q96KN3 472 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 NR1H4Q96RI1 486 aaPredicted RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 INTS2Q9H0H0 1204 aaKnown RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 RABEP2Q9H5N1 569 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 TXNRD2Q9NNW7 524 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 RNF146Q9NTX7 359 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 BAG5Q9UL15 447 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 RCE1Q9Y256 329 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 GDAQ9Y2T3 454 aa5.5□□□□□ -1.53
VRK1-203ENST00000555067 ZFP37Q9Y6Q3 630 aaPredicted RBP5.5□□□□□ -1.53
VRK1-203ENST00000555067 ABCC9O60706 1549 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 SLC38A8A6NNN8 435 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 A8MV72 311 aaPredicted RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 RTCAO00442 366 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 SEPT4O43236 478 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 MSI1O43347 362 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 TNFSF14O43557 240 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 CCNDBP1O95273 360 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 ACAA1P09110 424 aaPredicted RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 QDPRP09417 244 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 TAS2R50P59544 299 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 TBL3Q12788 808 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 SMC1AQ14683 1233 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 NFATC4Q14934 902 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 MMEL1Q495T6 779 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 ZNF569Q5MCW4 686 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 ANKRD40Q6AI12 368 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 RBM23Q86U06 439 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 EPHX4Q8IUS5 362 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 LMNTD2Q8IXW0 634 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 FRMD1Q8N878 549 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 ELP4Q96EB1 424 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 CCDC34Q96HJ3 373 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 C2orf40Q9H1Z8 148 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 SMARCAD1Q9H4L7 1026 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 CCDC134Q9H6E4 229 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 TLR8Q9NR97 1041 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms