RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 PTPRRQ15256 657 aa14.95□□□□□ -0.02
XRCC3-211ENST00000555055 AFMIDQ63HM1 303 aa14.95□□□□□ -0.02
XRCC3-211ENST00000555055 LINC00523Q86TU6 105 aa14.95□□□□□ -0.02
XRCC3-211ENST00000555055 CENPLQ8N0S6 344 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-211ENST00000555055 PPHLN1Q8NEY8 458 aaKnown RBP14.95□□□□□ -0.02
XRCC3-211ENST00000555055 ELMO2Q96JJ3 720 aa14.95□□□□□ -0.02
XRCC3-211ENST00000555055 NACA2Q9H009 215 aa14.95□□□□□ -0.02
XRCC3-211ENST00000555055 GREB1Q4ZG55 1949 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 SYN3O14994 580 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 SORBS2O94875 1100 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 PRSS56P0CW18 603 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 IMPDH2P12268 514 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 NCF2P19878 526 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 FGFR3P22607 806 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MPSTP25325 297 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MAGEA12P43365 314 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 RANBP1P43487 201 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 SGSHP51688 502 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 GEMP55040 296 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 ABCE1P61221 599 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 POLD3Q15054 466 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 PDPK2PQ6A1A2 396 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 BEND5Q7L4P6 421 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 RBM12BQ8IXT5 1001 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 LGI2Q8N0V4 545 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 OR7D4Q8NG98 312 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 ACTRT2Q8TDY3 377 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 AUTS2Q8WXX7 1259 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 WBP2Q969T9 261 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MCMBPQ9BTE3 642 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 FAM95CA0A1B0GW59 222 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TSPAN3O60637 253 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 PLK1P53350 603 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TAS2R39P59534 338 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 NAB1Q13506 487 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TUBB3Q13509 450 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 SLC9B1Q4ZJI4 515 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 SFT2D3Q587I9 215 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 RABGAP1LQ5R372 815 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 KDELC1Q6UW63 502 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 UGT2A3Q6UWM9 527 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 CLEC14AQ86T13 490 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TMEM126BQ8IUX1 230 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 WDR75Q8IWA0 830 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 FSTL5Q8N475 847 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 LZTR1Q8N653 840 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 OR6P1Q8NGX9 317 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 ZNF512Q96ME7 567 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 GATA5Q9BWX5 397 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 ACE2Q9BYF1 805 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 WDR55Q9H6Y2 383 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TLR8Q9NR97 1041 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 XPR1Q9UBH6 696 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 TLK1Q9UKI8 766 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 FNDC3AQ9Y2H6 1198 aaKnown RBP14.94□□□□□ -0.02
XRCC3-211ENST00000555055 FIS1Q9Y3D6 152 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MIA3Q5JRA6 1907 aa14.94□□□□□ -0.02
XRCC3-211ENST00000555055 MAGEB16A2A368 324 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 TMEM233B4DJY2 109 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 DENRO43583 198 aaKnown RBP14.93□□□□□ -0.02
XRCC3-211ENST00000555055 RAMP2O60895 175 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 HSPA4LO95757 839 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 JUNP05412 331 aaKnown RBP14.93□□□□□ -0.02
XRCC3-211ENST00000555055 GRIA2P42262 883 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 IDH3AP50213 366 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 ZNF135P52742 658 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-211ENST00000555055 NAGLUP54802 743 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 GPR17Q13304 367 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 PHTF2Q8N3S3 785 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 TMEM151AQ8N4L1 468 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 FBXO22Q8NEZ5 403 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 MIPOL1Q8TD10 442 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 PPP4R1Q8TF05 950 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 HHIPL1Q96JK4 782 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 BTN2A3PQ96KV6 586 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 GPR22Q99680 433 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 SEMA3CQ99985 751 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 SPON2Q9BUD6 331 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 VN1R3Q9BXE9 311 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 C1QTNF1Q9BXJ1 281 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.02
XRCC3-211ENST00000555055 RHOJQ9H4E5 214 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 CYP4F12Q9HCS2 524 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 SMPD4Q9NXE4 827 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 LMCD1Q9NZU5 365 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 TIMM44O43615 452 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 BMP1P13497 986 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 RHOQP17081 205 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 DNAJB2P25686 324 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 PDK3Q15120 406 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 ANO4Q32M45 955 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 TIGD7Q6NT04 549 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-211ENST00000555055 MSANTD2Q6P1R3 559 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 DENND1CQ8IV53 801 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 UMODL1-AS1Q8N2C9 162 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 BLOC1S5Q8TDH9 187 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 PPP1R14BQ96C90 147 aa14.93□□□□□ -0.02
XRCC3-211ENST00000555055 MARK4Q96L34 752 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms