RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FAM167BQ9BTA0 163 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 NLE1Q9NVX2 485 aaPredicted RBP8.96□□□□□ -0.97
TDP1-210ENST00000554976 ZDHHC7Q9NXF8 308 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 KLHL14Q9P2G3 628 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 SLC12A4Q9UP95 1085 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 HCFC2Q9Y5Z7 792 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 ARL5AQ9Y689 179 aa8.96□□□□□ -0.97
TDP1-210ENST00000554976 CCDC78A2IDD5 438 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 PRAMEF12O95522 483 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 PDHA1P08559 390 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 MYL4P12829 197 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 PTPN2P17706 415 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 ALDH3A1P30838 453 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 GBP2P32456 591 aaPredicted RBP8.96□□□□□ -0.98
TDP1-210ENST00000554976 ABCG1P45844 678 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 ITKQ08881 620 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 CCDC15Q0P6D6 951 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 DLG1Q12959 904 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 TYSND1Q2T9J0 566 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
TDP1-210ENST00000554976 NLRP9Q7RTR0 991 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 ARMC2Q8NEN0 867 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 MIEF2Q96C03 454 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 TMA16Q96EY4 203 aaKnown RBP8.96□□□□□ -0.98
TDP1-210ENST00000554976 CABS1Q96KC9 395 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 ZSWIM3Q96MP5 696 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 C7orf26Q96N11 449 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 TASP1Q9H6P5 420 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 ZNF358Q9NW07 568 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 MARK1Q9P0L2 795 aa8.96□□□□□ -0.98
TDP1-210ENST00000554976 MARCH4Q9P2E8 410 aaPredicted RBP8.96□□□□□ -0.98
TDP1-210ENST00000554976 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
TDP1-210ENST00000554976 MYOFQ9NZM1 2061 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 H0Y626 953 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 CBX4O00257 560 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 HAUS5O94927 633 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 S1PR4O95977 384 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 MT-CO1P00395 513 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SERPINF2P08697 491 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 CTBP1Q13363 440 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 FUT11Q495W5 492 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 N4BP2L1Q5TBK1 243 aaPredicted RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 LINGO4Q6UY18 593 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 ELMOD1Q8N336 334 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 TTC30BQ8N4P2 665 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 KIAA1958Q8N8K9 716 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 TDRD5Q8NAT2 981 aaKnown RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 LEMD2Q8NC56 503 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 LRRC8CQ8TDW0 803 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SH3RF2Q8TEC5 729 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SAMD11Q96NU1 681 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SMIM14Q96QK8 99 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 OMDQ99983 421 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SLC13A1Q9BZW2 595 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 ABCB8Q9NUT2 735 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 LSM7Q9UK45 103 aaKnown RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 ANKRD6Q9Y2G4 727 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 CCT8L1PA6NM43 557 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 K7ERQ8 282 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 SMAD6O43541 496 aaKnown RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 C2P06681 752 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 DLDP09622 509 aaKnown RBP8.95□□□□□ -0.98
TDP1-210ENST00000554976 SUOXP51687 545 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 GPR158Q5T848 1215 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 C16orf46Q6P387 395 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 LMNTD2Q8IXW0 634 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.95□□□□□ -0.98
TDP1-210ENST00000554976 ZNF398Q8TD17 642 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 EID2BQ96D98 161 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SORT1Q99523 831 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 OLFM1Q99784 485 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 C19orf43Q9BQ61 176 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 PITPNM3Q9BZ71 974 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 MUC3BQ9H195 1237 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 ABCF3Q9NUQ8 709 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 ARL2BPQ9Y2Y0 163 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 CDH23Q9H251 3354 aa8.95□□□□□ -0.98
TDP1-210ENST00000554976 H7C0S8 307 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CKMP06732 381 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CA3P07451 260 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PAMP19021 973 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 HLA-FP30511 346 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PGGT1BP53609 377 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PTPRCAPQ14761 206 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 TAF1AQ15573 450 aaPredicted RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 CNSTQ6PJW8 725 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 MFN1Q8IWA4 741 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 RFWD2Q8NHY2 731 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 STYXQ8WUJ0 223 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PIH1D2Q8WWB5 315 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 EXOC2Q96KP1 924 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 LRRC3BQ96PB8 259 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PAIP2Q9BPZ3 127 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 IGSF5Q9NSI5 407 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms