RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CSTF1Q05048 431 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PCSK7Q16549 785 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 USP39Q53GS9 565 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PIP5KL1Q5T9C9 394 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 FAXCQ5TGI0 409 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ERAP2Q6P179 960 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 USP45Q70EL2 814 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 CACUL1Q86Y37 369 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 NELL1Q92832 810 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 SCRN2Q96FV2 425 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 MCCC1Q96RQ3 725 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PRRX2Q99811 253 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 UTP11Q9Y3A2 253 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 A0A0J9YYE9 177 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 F5H423 210 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 AREL1O15033 823 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 TRBC1P01850 177 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 PDHA1P08559 390 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 IVDP26440 423 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 LMAN1P49257 510 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 SARNPP82979 210 aaKnown RBP16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 KCNJ11Q14654 390 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 POM121L1PQ3SYA9 428 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 C11orf74Q86VG3 221 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 HOOK3Q86VS8 718 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 ZSWIM9Q86XI8 627 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 PPIL6Q8IXY8 311 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 BBOF1Q8ND07 529 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 RMDN1Q96DB5 314 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 SPACA7Q96KW9 195 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 LYSMD1Q96S90 227 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 TBL1YQ9BQ87 522 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 FICDQ9BVA6 458 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 BTBD1Q9H0C5 482 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 NEUROG2Q9H2A3 272 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 SERGEFQ9UGK8 458 aa16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 TPX2Q9ULW0 747 aaKnown RBP16.54■□□□□ 0.24
SPTLC2-203ENST00000554901 EFCAB8A8MWE9 144 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 TSPAN6O43657 245 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 PLRG1O43660 514 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 CNR2P34972 360 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 DRG2P55039 364 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 ANGPT1Q15389 498 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 MAP7D1Q3KQU3 841 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 NOA1Q8NC60 698 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 MCUQ8NE86 351 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 CPT1BQ92523 772 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 SNF8Q96H20 258 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 LRFN3Q9BTN0 628 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 TPSD1Q9BZJ3 242 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 PCED1AQ9H1Q7 454 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 MAGEE1Q9HCI5 957 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 KMT2EQ8IZD2 1858 aa16.53■□□□□ 0.24
SPTLC2-203ENST00000554901 ANKRD36A6QL64 1941 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 IGHV1OR15-9A0A0B4J2B8 117 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 CAPN8A6NHC0 703 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 LRRC72A6NJI9 287 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 H0Y858 1186 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 DLL1O00548 723 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 CYP2A6P11509 494 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 CD6P30203 668 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 ABL2P42684 1182 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 PXNP49023 591 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 ADPRHP54922 357 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 QPCTQ16769 361 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 SIRPB2Q5JXA9 342 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 DUPD1Q68J44 220 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 TSSK4Q6SA08 328 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 SLC36A4Q6YBV0 504 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 TAB3Q8N5C8 712 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 OR2T34Q8NGX1 318 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 TRIM51Q9BSJ1 452 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 FRMD8Q9BZ67 464 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 TRABDQ9H4I3 376 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 PCDH12Q9NPG4 1184 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 WSB2Q9NYS7 404 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 HACD3Q9P035 362 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 CYP8B1Q9UNU6 501 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 SHOC2Q9UQ13 582 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 FADS3Q9Y5Q0 445 aa16.52■□□□□ 0.24
SPTLC2-203ENST00000554901 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 AGTP01019 485 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 ZNF30P17039 623 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 ITIH2P19823 946 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 MMP12P39900 470 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 FNTBP49356 437 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 TAS2R38P59533 333 aa16.51■□□□□ 0.23
SPTLC2-203ENST00000554901 CDH17Q12864 832 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms