RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 MINDY1Q8N5J2 469 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 UBL4BQ8N7F7 174 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 LENG8Q96PV6 779 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 LZTFL1Q9NQ48 299 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 CA5BQ9Y2D0 317 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 RAI2Q9Y5P3 530 aa13.01□□□□□ -0.33
MTHFD1-209ENST00000554768 CACNA1EQ15878 2313 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 KNL1Q8NG31 2342 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 A0A1W2PQ67 120 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 APOC4-APOC2K7ER74 178 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 KCNK3O14649 394 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 RAD51BO15315 384 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 FZD6O60353 706 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 PGLSO95336 258 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 APOC2P02655 101 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 MMP2P08253 660 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 HNRNPA2B1P22626 353 aaKnown RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 MMP12P39900 470 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 LIG3P49916 1009 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 FAM193AP78312 1265 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 SEMG2Q02383 582 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 DSC2Q02487 901 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 SGCGQ13326 291 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 PUM1Q14671 1186 aaKnown RBP eCLIP13□□□□□ -0.33
MTHFD1-209ENST00000554768 ERAP2Q6P179 960 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 ADAT2Q7Z6V5 191 aaKnown RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13□□□□□ -0.33
MTHFD1-209ENST00000554768 TFB1MQ8WVM0 346 aaKnown RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 SKA1Q96BD8 255 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 CENPTQ96BT3 561 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 HAUS1Q96CS2 278 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 PDLIM2Q96JY6 352 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 BMFQ96LC9 184 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 KLF6Q99612 283 aaPredicted RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 RTKNQ9BST9 563 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 WRAP53Q9BUR4 548 aaKnown RBP13□□□□□ -0.33
MTHFD1-209ENST00000554768 CEP41Q9BYV8 373 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 GAREM1Q9H706 876 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 IL21RQ9HBE5 538 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 FZD3Q9NPG1 666 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 PPP2R2CQ9Y2T4 447 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 HS3ST3A1Q9Y663 406 aa13□□□□□ -0.33
MTHFD1-209ENST00000554768 CFAP69A5D8W1 941 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 OPHN1O60890 802 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 NEBLO76041 1014 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 TJP3O95049 919 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PDHA1P08559 390 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 AKT2P31751 481 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 CETN2P41208 172 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 C21orf59P57076 290 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 CLDN2P57739 230 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 NXPH1P58417 271 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 WASHC5Q12768 1159 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 OVGP1Q12889 678 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 XRCC4Q13426 336 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 UAP1L1Q3KQV9 507 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 TEX44Q53QW1 395 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PRAMEF14Q5SWL7 426 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 ARMC12Q5T9G4 340 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 GCNT7Q6ZNI0 430 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 DPPA4Q7L190 304 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 CXorf40AQ8TE69 158 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PDCD6IPQ8WUM4 868 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PIH1D2Q8WWB5 315 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 ANP32BQ92688 251 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 TEKT5Q96M29 485 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 MYOCQ99972 504 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PHTF1Q9UMS5 762 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PPIL1Q9Y3C6 166 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 TTLL3Q9Y4R7 772 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 CEP192Q8TEP8 1941 aa12.99□□□□□ -0.33
MTHFD1-209ENST00000554768 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 POM121BA6NF01 834 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 HACD1B0YJ81 288 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 H0Y8X5 98 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 MTSS1O43312 755 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 TM7SF2O76062 418 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 CER1O95813 267 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 PRLP01236 227 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 C6P13671 934 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 CD59P13987 128 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 PTPN3P26045 913 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 SKOR1P84550 965 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 OTUD4Q01804 1114 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 RALGDSQ12967 914 aa12.98□□□□□ -0.33
MTHFD1-209ENST00000554768 SLC14A1Q13336 389 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms