RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 POMKQ9H5K3 350 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 CATSPERZQ9NTU4 200 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TDP1Q9NUW8 608 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 RWDD3Q9Y3V2 267 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 RAD54BQ9Y620 910 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 SRRM3A6NNA2 597 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 CXorf49A8MYA2 514 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 EPCAMP16422 314 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 NMBRP28336 390 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 CAPRIN1Q14444 709 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 ADGRF1Q5T601 910 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 PKN3Q6P5Z2 889 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 RTL3Q8N8U3 475 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 NENFQ9UMX5 172 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 SQORQ9Y6N5 450 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3DA0A087WVF3 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3IA0A087WXS9 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3EA0A087X179 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3KA0A087X1G2 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 RNF103-CHMP3A0A140T963 221 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3FA6NER0 549 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3LB9A6J9 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 BTN3A1O00481 513 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 NOL3O60936 208 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 KATNA1O75449 491 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3HP0C7X1 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 CCND1P24385 295 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 MZF1P28698 734 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 VIPR2P41587 438 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 ALFQ53S48 1182 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 UBAP2Q5T6F2 1119 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 SLC9A4Q6AI14 798 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3GQ6DHY5 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3CQ6IPX1 549 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 TBC1D3Q8IZP1 549 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 OR4K2Q8NGD2 314 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 PLLPQ9Y342 182 aa16.26■□□□□ 0.19
PPP4R3A-205ENST00000554684 ZDBF2Q9HCK1 2354 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TGM5O43548 720 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 RHOP08100 348 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 PFKMP08237 780 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 CCNCP24863 283 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 GCKP35557 465 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 CSKP41240 450 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 CDK7P50613 346 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 USP4Q13107 963 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 MTA1Q13330 715 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 SEMA5AQ13591 1074 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TRIP10Q15642 601 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 DLG2Q15700 870 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 PTPRNQ16849 979 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 UGT3A1Q6NUS8 523 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 ZSCAN18Q8TBC5 510 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TOP1MTQ969P6 601 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 YIPF2Q9BWQ6 316 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TAGLN3Q9UI15 199 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 SCOCQ9UIL1 159 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TDRKHQ9Y2W6 561 aaKnown RBP16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 ABLIM1O14639 778 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 COCHO43405 550 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 TFEBP19484 476 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 MSH3P20585 1137 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 BMPR1AP36894 532 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 FBXO48Q5FWF7 155 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 LY6G5CQ5SRR4 150 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 CAMK1DQ8IU85 385 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 MATN3O15232 486 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 GKP32189 559 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 FOXN2P32314 431 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 MLLT6P55198 1093 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 POLR2LP62875 67 aaKnown RBP16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 MPP1Q00013 466 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 PFKFB4Q16877 469 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 AGKQ53H12 422 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 RAET1GQ6H3X3 334 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 USP45Q70EL2 814 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 IGDCC3Q8IVU1 814 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 SEC14L1Q92503 715 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 ZNF333Q96JL9 665 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 RAI2Q9Y5P3 530 aa16.25■□□□□ 0.19
PPP4R3A-205ENST00000554684 AXIN1O15169 862 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 RNASEH2AO75792 299 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 RFC2P35250 354 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 ABCE1P61221 599 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 MBTPS1Q14703 1052 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 ARHGAP36Q6ZRI8 547 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 MYO1HQ8N1T3 1032 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 FBXO39Q8N4B4 442 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 ACMSDQ8TDX5 336 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 ADAM7Q9H2U9 754 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 MRPL46Q9H2W6 279 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 FAM53CQ9NYF3 392 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 A0A0D9SEW6 157 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 FSHRP23945 695 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 RAB10P61026 200 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 DSG4Q86SJ6 1040 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 DENND6AQ8IWF6 608 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 SCUBE1Q8IWY4 988 aa16.24■□□□□ 0.19
PPP4R3A-205ENST00000554684 DEFB107AQ8IZN7 70 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms