RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 AQP9O43315 295 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 NOL3O60936 208 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CNMDO75829 334 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 MPOP05164 745 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CCNA2P20248 432 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 BST2Q10589 180 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 LRP8Q14114 963 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 DGKDQ16760 1214 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 DEPDC1Q5TB30 811 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TMEM214Q6NUQ4 689 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CATSPER4Q7RTX7 472 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 ERMP1Q7Z2K6 904 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CAMK1DQ8IU85 385 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 FSTL5Q8N475 847 aaPredicted RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CYGBQ8WWM9 190 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 STARD8Q92502 1023 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 NXNL1Q96CM4 212 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 C11orf84Q9BUA3 381 aaPredicted RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TDRD1Q9BXT4 1180 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 SIK2Q9H0K1 926 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CACNA2D2Q9NY47 1150 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CCDC167Q9P0B6 97 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 RBPJLQ9UBG7 517 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 GIT1Q9Y2X7 761 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 JAK1P23458 1154 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 GRIA3P42263 894 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 NR2C2P49116 596 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 HK2P52789 917 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 OFCC1Q8IZS5 231 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 PCYOX1LQ8NBM8 494 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 SPAG4Q9NPE6 437 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 BFARQ9NZS9 450 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 GIMAP2Q9UG22 337 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 PAPPA2Q9BXP8 1791 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TPST1O60507 370 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 MATN1P21941 496 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TNFAIP2Q03169 654 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 LAMC2Q13753 1193 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC36A3Q495N2 470 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 FBXO48Q5FWF7 155 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 GPRIN1Q7Z2K8 1008 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 EPHX4Q8IUS5 362 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 MED10Q9BTT4 135 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CHST12Q9NRB3 414 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TMEM30AQ9NV96 361 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 CD300AQ9UGN4 299 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 DAPK2Q9UIK4 370 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 AURKCQ9UQB9 309 aa17.04■□□□□ 0.32
PPP4R3A-202ENST00000554390 TANC1Q9C0D5 1861 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 RNF103-CHMP3A0A140T963 221 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 YJEFN3A6XGL0 299 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 MATKP42679 507 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 YAP1P46937 504 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 TNK2Q07912 1038 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 REP15Q6BDI9 236 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 THOC7Q6I9Y2 204 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZYG11AQ6WRX3 759 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 DNAJC14Q6Y2X3 702 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 LDB1Q86U70 411 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 DHFR2Q86XF0 187 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 MTG1Q9BT17 334 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 NAT9Q9BTE0 207 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 VRTNQ9H8Y1 702 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 SACM1LQ9NTJ5 587 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 B3GNT3Q9Y2A9 372 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 TTC3P53804 2025 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 GAS2O43903 313 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 KDM1AO60341 852 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 BCL10O95999 233 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 PABPC1P11940 636 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 PTPN9P43378 593 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 AFF1P51825 1210 aaKnown RBP17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 MLLT10P55197 1068 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 STX5Q13190 355 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 C6orf183Q5T699 404 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 PHF21BQ96EK2 531 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZFP42Q96MM3 310 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 IL22Q9GZX6 179 aa17.03■□□□□ 0.32
PPP4R3A-202ENST00000554390 KPNA4O00629 521 aaPredicted RBP17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 AHSGP02765 367 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 PPIL2Q13356 520 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 C9orf57Q5W0N0 161 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 TMEM151AQ8N4L1 468 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 HMGCLL1Q8TB92 370 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms