RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZNF135P52742 658 aaPredicted RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 HK3P52790 923 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 INPP5AQ14642 412 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 AGERQ15109 404 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 ASIC2Q16515 512 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 CA9Q16790 459 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 BROXQ5VW32 411 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 LVRNQ6Q4G3 990 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 RBM44Q6ZP01 1051 aaKnown RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 RFX8Q6ZV50 586 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 GPR155Q7Z3F1 870 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 HID1Q8IV36 788 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 PSTKQ8IV42 348 aaKnown RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 PAF1Q8N7H5 531 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 TSEN2Q8NCE0 465 aaKnown RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 HIC2Q96JB3 615 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 APOOQ9BUR5 198 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 SNRNP25Q9BV90 132 aaKnown RBP18.91■□□□□ 0.62
CPSF2-203ENST00000554290 CLPBQ9H078 707 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 SP110Q9HB58 689 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 ATP8A1Q9Y2Q0 1164 aa18.91■□□□□ 0.62
CPSF2-203ENST00000554290 TEX51A0A1B0GUA7 166 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 TK2O00142 265 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 ATMINO43313 823 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 FTLP02792 175 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 GZMAP12544 262 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 ERCC2P18074 760 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 RBMS1P29558 406 aaKnown RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 MMP12P39900 470 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 UCNP55089 124 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 RFTN1Q14699 578 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 NFATC4Q14934 902 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 PPP6R3Q5H9R7 873 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 PERM1Q5SV97 790 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 CRTC1Q6UUV9 634 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 ARFGAP1Q8N6T3 406 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 FNIP1Q8TF40 1166 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 NAF1Q96HR8 494 aaKnown RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 KCTD15Q96SI1 283 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 BPIFA3Q9BQP9 254 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 CINPQ9BW66 212 aaPredicted RBP18.9■□□□□ 0.62
CPSF2-203ENST00000554290 HAUS4Q9H6D7 363 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 AIPL1Q9NZN9 384 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 SCINQ9Y6U3 715 aa18.9■□□□□ 0.62
CPSF2-203ENST00000554290 CFAP69A5D8W1 941 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 DFFAO00273 331 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ATXN7O15265 892 aaPredicted RBP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 MIPP30301 263 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 HCAR3P49019 387 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 SRP54P61011 504 aaKnown RBP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 CXADRP78310 365 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 BCL2L1Q07817 233 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 IL10RBQ08334 325 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 MTM1Q13496 603 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ALG11Q2TAA5 492 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 C3orf38Q5JPI3 329 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 AFMIDQ63HM1 303 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 IGF2-ASQ6U949 168 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ENPP7Q6UWV6 458 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 RD3Q7Z3Z2 195 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 GKN2Q86XP6 184 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 LZTR1Q8N653 840 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ARL10Q8N8L6 244 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 LSM14AQ8ND56 463 aaKnown RBP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 TSACCQ96A04 125 aaPredicted RBP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 TRIM11Q96F44 468 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ATXN7L3BQ96GX2 97 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 PEBP4Q96S96 227 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 EDEM3Q9BZQ6 932 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 GULP1Q9UBP9 304 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 KLQ9UEF7 1012 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 CNOT8Q9UFF9 292 aaKnown RBP18.89■□□□□ 0.61
CPSF2-203ENST00000554290 SATB2Q9UPW6 733 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 ENTPD2Q9Y5L3 495 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 CELSR3Q9NYQ7 3312 aa18.89■□□□□ 0.61
CPSF2-203ENST00000554290 RGRP47804 291 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 RENBPP51606 427 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 KLHL30Q0D2K2 578 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 SPIDRQ14159 915 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 ZNF571Q7Z3V5 609 aaPredicted RBP18.88■□□□□ 0.61
CPSF2-203ENST00000554290 ZSWIM9Q86XI8 627 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 ARHGAP12Q8IWW6 846 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 KCNE4Q8WWG9 221 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 SLC39A7Q92504 469 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 WDR92Q96MX6 357 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 SLC46A1Q96NT5 459 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 DPH1Q9BZG8 443 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 ZWILCHQ9H900 591 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
CPSF2-203ENST00000554290 ASCL3Q9NQ33 180 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 OR1A2Q9Y585 309 aa18.88■□□□□ 0.61
CPSF2-203ENST00000554290 A0A1W2PQC6 194 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 TNFP01375 233 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 PRKCGP05129 697 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 PCCBP05166 539 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 CELA2BP08218 269 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms