RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 KCNH7Q9NS40 1196 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MRGBPQ9NV56 204 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ETAA1Q9NY74 926 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 HACD3Q9P035 362 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 HAO1Q9UJM8 370 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 CDY2AQ9Y6F7 541 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 STYXL1Q9Y6J8 313 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MYO7AQ13402 2215 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ZDBF2Q9HCK1 2354 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 MYH9P35579 1960 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ADAMTS20P59510 1910 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ATG2AQ2TAZ0 1938 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 hCG_1818297A0A087WSY0 165 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DENND3A2RUS2 1198 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM191CA6NGB0 347 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF487B1APH4 448 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 POC1B-GALNT4F8VUJ3 575 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 FFAR3O14843 346 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PER2O15055 1255 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CHADO15335 359 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SLC16A4O15374 487 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PSMG1O95456 288 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PDGFBP01127 241 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ADRB2P07550 413 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM191BP0C7N4 346 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 T-ENOLP0DO92 83 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 KRT4P19013 534 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 MMP8P22894 467 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CD52P31358 61 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 RPA3P35244 121 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PIK3CAP42336 1068 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NPTX2P47972 431 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CLCN5P51795 746 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CCNHP51946 323 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PEX3P56589 373 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 MRPS6P82932 125 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 MRPS9P82933 396 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DSG1Q02413 1049 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SLC18A2Q05940 514 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DEUP1Q05D60 604 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PDIA2Q13087 525 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 GPS1Q13098 491 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NAB1Q13506 487 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TFDP2Q14188 446 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TAZQ16635 292 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 C21orf62-AS1Q17RA5 79 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 XKR9Q5GH70 373 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SPOUT1Q5T280 376 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 FAM102BQ5T8I3 360 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NAIF1Q69YI7 327 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CES5AQ6NT32 575 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DNAJC24Q6P3W2 148 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM154Q6P9G4 183 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CD300LDQ6UXZ3 194 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 LRRC74BQ6ZQY2 392 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 FAM47EQ6ZV65 393 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 BBS12Q6ZW61 710 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DNAAF5Q86Y56 855 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CBWD2Q8IUF1 395 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PALM2Q8IXS6 379 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ST13P4Q8IZP2 240 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ADGRG2Q8IZP9 1017 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NME8Q8N427 588 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM105Q8N8V8 129 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 BANPQ8N9N5 519 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 STKLD1Q8NE28 680 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CYP2W1Q8TAV3 490 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SLC35B2Q8TB61 432 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TAS1R2Q8TE23 839 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DNAJB3Q8WWF6 145 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 STON2Q8WXE9 905 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 RSAD2Q8WXG1 361 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ATG4AQ8WYN0 398 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SEMA4DQ92854 862 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 GFM2Q969S9 779 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC127Q96BQ5 260 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 HAUS1Q96CS2 278 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PTCD3Q96EY7 689 aaKnown RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 C9orf72Q96LT7 481 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NECTIN4Q96NY8 510 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 GBP5Q96PP8 586 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 PAFAH2Q99487 392 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CGRRF1Q99675 332 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 GORASP1Q9BQQ3 440 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 GCOM2Q9BZD3 368 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 CD244Q9BZW8 370 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TRIM4Q9C037 500 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 MFSD1Q9H3U5 465 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 DENND2DQ9H6A0 471 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NMRK1Q9NWW6 199 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ZDHHC7Q9NXF8 308 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 NDE1Q9NXR1 346 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 ERAP1Q9NZ08 941 aa6.04□□□□□ -1.44
VPS33B-203ENST00000554264 TBK1Q9UHD2 729 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms