RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DDX50Q9BQ39 737 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 BOCQ9BWV1 1114 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 SLC12A9Q9BXP2 914 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 SRRTQ9BXP5 876 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 PANK2Q9BZ23 570 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 DNAI2Q9GZS0 605 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 EPB41L5Q9HCM4 733 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 GPR27Q9NS67 375 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 CGNQ9P2M7 1197 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 PISDQ9UG56 409 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 SRPRBQ9Y5M8 271 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 TP53BP1Q12888 1972 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 MED13Q9UHV7 2174 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 TYW5A2RUC4 315 aaKnown RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 A6NNZ2 444 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 YJEFN3A6XGL0 299 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 E7ENQ6 273 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 C1QTNF3-AMACRE9PGA6 284 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 TSPAN15O95858 294 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CBX7O95931 251 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ZNF18P17022 549 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CD82P27701 267 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CCKBRP32239 447 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 STAT6P42226 847 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 SLC8A3P57103 927 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 SULT2A1Q06520 285 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 DCAF6Q58WW2 860 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 PIP5KL1Q5T9C9 394 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ARHGAP17Q68EM7 881 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 NADSYN1Q6IA69 706 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 OR6B2Q6IFH4 312 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 PTAR1Q7Z6K3 402 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 PARGQ86W56 976 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 NELFCDQ8IXH7 590 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ANKRD52Q8NB46 1076 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 UBE2FQ969M7 185 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 TMEM159Q96B96 161 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CLIC6Q96NY7 704 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 GFM1Q96RP9 751 aaKnown RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 DPH2Q9BQC3 489 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 SYNDIG1Q9H7V2 258 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 APOBEC3GQ9HC16 384 aaKnown RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ZNF71Q9NQZ8 489 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ABCC13Q9NSE7 274 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 FOXJ2Q9P0K8 574 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 PADI4Q9UM07 663 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 ZFR2Q9UPR6 939 aaKnown RBP7.01□□□□□ -1.29
ATXN3-224ENST00000554040 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 UNC13CQ8NB66 2214 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 F8P00451 2351 aa7.01□□□□□ -1.29
ATXN3-224ENST00000554040 A0A087X0B3 334 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 PRAMEF33A0A0G2JMD5 474 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 POM121BA6NF01 834 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 WASH4PA8MWX3 477 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 TULP2O00295 520 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 IKBKBO14920 756 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 XPO1O14980 1071 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 MCF2LO15068 1137 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ALOX15BO15296 676 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 MTSS1O43312 755 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 PRAMEF10O60809 474 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 GCATO75600 419 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 AGFG2O95081 481 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 LUC7L3O95232 432 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 HLA-DRAP01903 254 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ESR1P03372 595 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 CD58P19256 250 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ELAVL4P26378 380 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 RABIFP47224 123 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ADKP55263 362 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 TBX4P57082 545 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 DLG4P78352 724 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 CCL7P80098 99 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 EIF2B5Q13144 721 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 SLC12A1Q13621 1099 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ZNF394Q53GI3 561 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 MS4A13Q5J8X5 152 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 FAM26FQ5R3K3 315 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 FHL5Q5TD97 284 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 SEL1L3Q68CR1 1132 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 ESRP1Q6NXG1 681 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 MSANTD2Q6P1R3 559 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 KYAT3Q6YP21 454 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 CDH24Q86UP0 819 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 TICAM1Q8IUC6 712 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 CFAP52Q8N1V2 620 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 DNAJB8Q8NHS0 232 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 USP7Q93009 1102 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 PPP1R13BQ96KQ4 1090 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 Q96M66 194 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 SLC17A9Q9BYT1 436 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms