RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 A0A1W2PR77 199 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 IGLON5A6NGN9 336 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 KCNK1O00180 336 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 TLR4O00206 839 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 CDX4O14627 284 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 SLC30A4O14863 429 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 FZD6O60353 706 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 CER1O95813 267 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 PAK4O96013 591 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 HLA-DQB2P05538 268 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 ZNF883P0CG24 379 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 CYP2A6P11509 494 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 PECAM1P16284 738 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 MSNP26038 577 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 PTPN3P26045 913 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 MAT2AP31153 395 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 CSNK1EP49674 416 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 C21orf59P57076 290 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD8-206ENST00000553870 NOMO1Q15155 1222 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 STPG1Q5TH74 334 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 TCEAL6Q6IPX3 200 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 DPPA4Q7L190 304 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 ADAT2Q7Z6V5 191 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 ACTL9Q8TC94 416 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 PIH1D2Q8WWB5 315 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 HTR3CQ8WXA8 447 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 TCEAL3Q969E4 200 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 SCRN2Q96FV2 425 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 IMP4Q96G21 291 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 NSMCE3Q96MG7 304 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 QKIQ96PU8 341 aaKnown RBP eCLIP9.4□□□□□ -0.93e-11■■■■■ 46.3
CHD8-206ENST00000553870 SRPK1Q96SB4 655 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 EDEM2Q9BV94 578 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 CARD9Q9H257 536 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 GLOD4Q9HC38 313 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 AASDHPPTQ9NRN7 309 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
CHD8-206ENST00000553870 DNPEPQ9ULA0 475 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
CHD8-206ENST00000553870 H7C0C1 242 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 PSMD11O00231 422 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 FPGTO14772 594 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SLC31A1O15431 190 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 YKT6O15498 198 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SPINT1O43278 529 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 OPHN1O60890 802 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 STK10O94804 968 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 CPP00450 1065 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 EPOP01588 193 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 RBP3P10745 1247 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 MMP12P39900 470 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CTSKP43235 329 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 ATP5OP48047 213 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 EIF3EP60228 445 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 YPEL5P62699 121 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 FAM193AP78312 1265 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 DSC2Q02487 901 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 NIPAL4Q0D2K0 466 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CCDC173Q0VFZ6 552 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 WASHC5Q12768 1159 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 TRAF2Q12933 501 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 GRIK2Q13002 908 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 ZBTB17Q13105 803 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 KLF1Q13351 362 aaPredicted RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 LLGL1Q15334 1064 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 KIF19Q2TAC6 998 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SEL1L2Q5TEA6 688 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SEL1L3Q68CR1 1132 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 ABI3BPQ7Z7G0 1075 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 ZC3H18Q86VM9 953 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 REXO1L1PQ8IX06 675 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CBARPQ8N350 705 aaPredicted RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 OXR1Q8N573 874 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 PDCD6IPQ8WUM4 868 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 MAIP1Q8WWC4 291 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 TADA1Q96BN2 335 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CENPTQ96BT3 561 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 KLHDC7BQ96G42 594 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SLC6A18Q96N87 628 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 AGAP3Q96P47 875 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 PPP1R2P1Q96PQ5 205 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 FCRL5Q96RD9 977 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 MCCC1Q96RQ3 725 aaPredicted RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 KLF6Q99612 283 aaPredicted RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 ADGRE3Q9BY15 652 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 DLL3Q9NYJ7 618 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 SEPT10Q9P0V9 454 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
CHD8-206ENST00000553870 JRKLQ9Y4A0 524 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 TTLL3Q9Y4R7 772 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms