RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 PREBQ9HCU5 417 aa8.28□□□□□ -1.08
RDH11-205ENST00000553816 NT5MQ9NPB1 228 aa8.28□□□□□ -1.08
RDH11-205ENST00000553816 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
RDH11-205ENST00000553816 DKK3Q9UBP4 350 aa8.28□□□□□ -1.08
RDH11-205ENST00000553816 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
RDH11-205ENST00000553816 HEY1Q9Y5J3 304 aa8.28□□□□□ -1.08
RDH11-205ENST00000553816 hCG_1818297A0A087WSY0 165 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 A0A0U1RQS6 177 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 TSPAN11A1L157 253 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MACROD2A1Z1Q3 448 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 IGLON5A6NGN9 336 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 KCNK1O00180 336 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MATN3O15232 486 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 PSTPIP1O43586 416 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MMP20O60882 483 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 PAK4O96013 591 aaPredicted RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 HLA-DQB2P05538 268 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SYPP08247 313 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CD59P13987 128 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CCNCP24863 283 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CD38P28907 300 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CTSKP43235 329 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MMP13P45452 471 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 AFF3P51826 1226 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 CLDN2P57739 230 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CCZ1BP86790 482 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CCZ1P86791 482 aaPredicted RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 PPIDQ08752 370 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 TRAF2Q12933 501 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 ZBTB17Q13105 803 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 ZNF235Q14590 738 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 IFI16Q16666 785 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 UGP2Q16851 508 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MARC1Q5VT66 337 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 KAZNQ674X7 775 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 NAPEPLDQ6IQ20 393 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 NEK5Q6P3R8 708 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SPOCD1Q6ZMY3 1216 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 GCNT7Q6ZNI0 430 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 RABEPKQ7Z6M1 372 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 NT5DC3Q86UY8 548 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 VSIG1Q86XK7 387 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SPATS2Q86XZ4 545 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 RFX6Q8HWS3 928 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 LRRC8AQ8IWT6 810 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 TMEM145Q8NBT3 493 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 ECHDC3Q96DC8 303 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 BMFQ96LC9 184 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CAMK1GQ96NX5 476 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 OLFM3Q96PB7 478 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SMIM14Q96QK8 99 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 KLF6Q99612 283 aaPredicted RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 RTKNQ9BST9 563 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SLC17A9Q9BYT1 436 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 GAREM1Q9H706 876 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 NOD2Q9HC29 1040 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 LUC7LQ9NQ29 371 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 AASDHPPTQ9NRN7 309 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 PACSIN2Q9UNF0 486 aaPredicted RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
RDH11-205ENST00000553816 COQ6Q9Y2Z9 468 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 PCDHGC4Q9Y5F7 938 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 CAPN6Q9Y6Q1 641 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 SCN8AQ9UQD0 1980 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 MYLKQ15746 1914 aa8.27□□□□□ -1.09
RDH11-205ENST00000553816 PIEZO1Q92508 2521 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 POM121BA6NF01 834 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 A8MX80 341 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 APOL1O14791 398 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 VILLO15195 856 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 HTRA2O43464 458 aaPredicted RBP8.26□□□□□ -1.09
RDH11-205ENST00000553816 CST8O60676 142 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 OPHN1O60890 802 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 ZRANB2O95218 330 aaKnown RBP eCLIP8.26□□□□□ -1.09
RDH11-205ENST00000553816 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
RDH11-205ENST00000553816 FTCDO95954 541 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 JCHAINP01591 159 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 PDHA1P08559 390 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 CCNB1P14635 433 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 GM2AP17900 193 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 CTNNA2P26232 953 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 SERPINA4P29622 427 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 CTNNA1P35221 906 aaKnown RBP8.26□□□□□ -1.09
RDH11-205ENST00000553816 PEX5P50542 639 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 RENBPP51606 427 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 ATXN3P54252 364 aaPredicted RBP8.26□□□□□ -1.09
RDH11-205ENST00000553816 NAP1L1P55209 391 aaKnown RBP8.26□□□□□ -1.09
RDH11-205ENST00000553816 GSDMDP57764 484 aa8.26□□□□□ -1.09
RDH11-205ENST00000553816 AP1S1P61966 158 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms