RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SPRY4Q9C004 299 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 MROH8Q9H579 483 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 EBF2Q9HAK2 575 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 VDAC3Q9Y277 283 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 SNX9Q9Y5X1 595 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ADGRF5Q8IZF2 1346 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 ATXN2Q99700 1313 aaKnown RBP4.04□□□□□ -1.76
SCFD1-210ENST00000553693 VWA3AA6NCI4 1184 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 SH2D7A6NKC9 451 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-210ENST00000553693 HNRNPCL2B2RXH8 293 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 B9A039 149 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 PER2O15055 1255 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 KLK10O43240 276 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 KDM4BO94953 1096 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 SLC2A4P14672 509 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 EFR3AQ14156 821 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 NAA25Q14CX7 972 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 OASLQ15646 514 aaKnown RBP4.04□□□□□ -1.76
SCFD1-210ENST00000553693 AMZ1Q400G9 498 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 STPG1Q5TH74 334 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 C17orf99Q6UX52 265 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 TMPRSS12Q86WS5 348 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 PARP16Q8N5Y8 322 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 MAB21L3Q8N8X9 362 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 NOC3LQ8WTT2 800 aaKnown RBP4.04□□□□□ -1.76
SCFD1-210ENST00000553693 CD101Q93033 1021 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 COG8Q96MW5 612 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 CDC14AQ9UNH5 594 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 A3GALT2U3KPV4 340 aa4.04□□□□□ -1.76
SCFD1-210ENST00000553693 THOC2Q8NI27 1593 aaKnown RBP4.03□□□□□ -1.76
SCFD1-210ENST00000553693 A0A0U1RQF3 1178 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 FAM90A7PA6NKC0 464 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 HSPB2A8KAH6 182 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 FAM90A22PA8MWA6 464 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 FAM90A12PA8MX19 464 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 FAM90A23PA8MXZ1 464 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 KLRF2D3W0D1 207 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 ZIC3O60481 467 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 LMX1BO60663 402 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CLDN14O95500 239 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 LINC00271P0C7V0 271 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 PIGAP37287 484 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 TRAPPC10P48553 1259 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CXCR3P49682 368 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 NR1H2P55055 460 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 ARL4CP56559 192 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 NLRP5P59047 1200 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 TAF5Q15542 800 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 HSPB2Q16082 182 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 ACCSLQ4AC99 568 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-210ENST00000553693 MEX3BQ6ZN04 569 aaKnown RBP4.03□□□□□ -1.76
SCFD1-210ENST00000553693 ZNF771Q7L3S4 317 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-210ENST00000553693 SFR1Q86XK3 245 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 HERC6Q8IVU3 1022 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CREB3L4Q8TEY5 395 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 C3orf30Q96M34 536 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CLSTN3Q9BQT9 956 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 SLC32A1Q9H598 525 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 SLC9A2Q9UBY0 812 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 CARD8Q9Y2G2 431 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 ATAD2BQ9ULI0 1458 aa4.03□□□□□ -1.76
SCFD1-210ENST00000553693 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 PABPN1LA6NDY0 278 aaKnown RBP4.02□□□□□ -1.77
SCFD1-210ENST00000553693 PRR23AA6NEV1 266 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 HNRNPH1P31943 449 aaKnown RBP4.02□□□□□ -1.77
SCFD1-210ENST00000553693 GPD2P43304 727 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 RHBDL3P58872 404 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 ZBTB17Q13105 803 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 ITGADQ13349 1161 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 NEDD9Q14511 834 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SOWAHAQ2M3V2 549 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 FBXO47Q5MNV8 452 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 PMS2CLQ68D20 193 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 FOXL2NBQ6ZUU3 175 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 MOB3CQ70IA8 216 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SPATA5Q8NB90 893 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 FIG4Q92562 907 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 TANKQ92844 425 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SNAPC3Q92966 411 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 ERGIC1Q969X5 290 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 TWNKQ96RR1 684 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 PYM1Q9BRP8 204 aaKnown RBP4.02□□□□□ -1.77
SCFD1-210ENST00000553693 TAOK3Q9H2K8 898 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 SMYD2Q9NRG4 433 aa4.02□□□□□ -1.77
SCFD1-210ENST00000553693 CISD1Q9NZ45 108 aaKnown RBP4.02□□□□□ -1.77
SCFD1-210ENST00000553693 FAM172BPA6NC97 362 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 RFPL2O75678 378 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 SRCP12931 536 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 MCM3P25205 808 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 STX2P32856 288 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 PHEXP78562 749 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 ADGRG6Q86SQ4 1221 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 FAM160B2Q86V87 743 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms