RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 C21orf59P57076 290 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 FAM193AP78312 1265 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 OTUD4Q01804 1114 aaKnown RBP22.98■■□□□ 1.27
TDP1-206ENST00000553569 BNC1Q01954 994 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 NIPAL4Q0D2K0 466 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 FGL2Q14314 439 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 NOMO1Q15155 1222 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 ALG1LQ6GMV1 187 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 CNTD1Q8N815 330 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 QKIQ96PU8 341 aaKnown RBP eCLIP22.98■■□□□ 1.27
TDP1-206ENST00000553569 FAM118BQ9BPY3 351 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 SLC17A9Q9BYT1 436 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 ANKRD6Q9Y2G4 727 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 PCDHB9Q9Y5E1 797 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 RAI2Q9Y5P3 530 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 TMEM131Q92545 1883 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 LRRK1Q38SD2 2015 aa22.98■■□□□ 1.27
TDP1-206ENST00000553569 PRAMEF26H0Y7S4 382 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 H7C0C1 242 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 CDX4O14627 284 aaPredicted RBP22.97■■□□□ 1.27
TDP1-206ENST00000553569 RIOK3O14730 519 aaKnown RBP22.97■■□□□ 1.27
TDP1-206ENST00000553569 TJP3O95049 919 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 HNRNPA2B1P22626 353 aaKnown RBP22.97■■□□□ 1.27
TDP1-206ENST00000553569 PTPN3P26045 913 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 MMP12P39900 470 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 ATP5OP48047 213 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 POLR2LP62875 67 aaKnown RBP22.97■■□□□ 1.27
TDP1-206ENST00000553569 SGCGQ13326 291 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 STAT4Q14765 748 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 KIF19Q2TAC6 998 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 UAP1L1Q3KQV9 507 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 TMEM52BQ4KMG9 183 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 SLC45A4Q5BKX6 768 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 ARMC12Q5T9G4 340 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 MINDY1Q8N5J2 469 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 ARRDC2Q8TBH0 407 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 ACTL9Q8TC94 416 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 SNX11Q9Y5W9 270 aa22.97■■□□□ 1.27
TDP1-206ENST00000553569 A0A1W2PR77 199 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 VILLO15195 856 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 PGLSO95336 258 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 PAK4O96013 591 aaPredicted RBP22.96■■□□□ 1.27
TDP1-206ENST00000553569 CES1P23141 567 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 CD86P42081 329 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 LIMK1P53667 647 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 ZSCAN30Q86W11 494 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 RMDN1Q96DB5 314 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 ZDHHC5Q9C0B5 715 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 C10orf88Q9H8K7 445 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 COQ6Q9Y2Z9 468 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 CFAP54Q96N23 3096 aa22.96■■□□□ 1.27
TDP1-206ENST00000553569 A0A1W2PQ67 120 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 A8MX80 341 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 HACD1B0YJ81 288 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 H0Y8X5 98 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 RAD51BO15315 384 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 TM7SF2O76062 418 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 CLDN2P57739 230 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 EIF3EP60228 445 aaKnown RBP22.95■■□□□ 1.26
TDP1-206ENST00000553569 IHHQ14623 411 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 RPS6KA1Q15418 735 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 SEL1L2Q5TEA6 688 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 MEI1Q5TIA1 1274 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 TMEM145Q8NBT3 493 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 SKA1Q96BD8 255 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 C1QTNF2Q9BXJ5 285 aa22.95■■□□□ 1.26
TDP1-206ENST00000553569 GOLGA6L9A6NEM1 432 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 SLC30A4O14863 429 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 CER1O95813 267 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 MMP2P08253 660 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 PDHA1P08559 390 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 C6P13671 934 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 CA4P22748 312 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 LIG3P49916 1009 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 WASHC5Q12768 1159 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 RALGDSQ12967 914 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 XRCC4Q13426 336 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 HLA-BQ31612 363 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 TEX44Q53QW1 395 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 IL27RAQ6UWB1 636 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 GCNT7Q6ZNI0 430 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 DPPA4Q7L190 304 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 CDKL3Q8IVW4 592 aaPredicted RBP22.94■■□□□ 1.26
TDP1-206ENST00000553569 TRIM58Q8NG06 486 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 HTR3CQ8WXA8 447 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 RBM15Q96T37 977 aaKnown RBP eCLIP22.94■■□□□ 1.26
TDP1-206ENST00000553569 TDRD1Q9BXT4 1180 aaKnown RBP22.94■■□□□ 1.26
TDP1-206ENST00000553569 GAREM1Q9H706 876 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 IL21RQ9HBE5 538 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 KLHL8Q9P2G9 620 aaPredicted RBP22.94■■□□□ 1.26
TDP1-206ENST00000553569 B4GALT6Q9UBX8 382 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 PHTF1Q9UMS5 762 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 CHKBQ9Y259 395 aa22.94■■□□□ 1.26
TDP1-206ENST00000553569 CEP250Q9BV73 2442 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 KCNK3O14649 394 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 MTSS1O43312 755 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 OPHN1O60890 802 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 ELFN1P0C7U0 828 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 CTPS1P17812 591 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 RBL1P28749 1068 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms