RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RHOAP61586 193 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 RAD51Q06609 339 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 C16orf72Q14CZ0 275 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 MAP9Q49MG5 647 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PHF19Q5T6S3 580 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 ZNF354CQ86Y25 554 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PTRH1Q86Y79 214 aaKnown RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 IRF2BP1Q8IU81 584 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PLA2G15Q8NCC3 412 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 OR1E3Q8WZA6 343 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM159Q96B96 161 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 TBC1D31Q96DN5 1066 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 EXOC2Q96KP1 924 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 WDR92Q96MX6 357 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 CMKLR1Q99788 373 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 SEMA6CQ9H3T2 930 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 FGF22Q9HCT0 170 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM51Q9NW97 253 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 GEMIN8Q9NWZ8 242 aaKnown RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 LHX3Q9UBR4 397 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 APPL1Q9UKG1 709 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
SYNE2-209ENST00000553308 DOPEY2Q9Y3R5 2298 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 A0A1W2PQC6 194 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 TNFP01375 233 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 PRKCGP05129 697 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 MMEP08473 750 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 CCL4P13236 92 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 MTIF2P46199 727 aaKnown RBP9.15□□□□□ -0.94
SYNE2-209ENST00000553308 BPIFB4P59827 614 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 NOMO3P69849 1222 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 ELP6Q0PNE2 266 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 MTM1Q13496 603 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 HLTFQ14527 1009 aaKnown RBP eCLIP9.15□□□□□ -0.94
SYNE2-209ENST00000553308 SKIDA1Q1XH10 827 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 C14orf28Q4W4Y0 310 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 NAA35Q5VZE5 725 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 DPY19L2P1Q6NXN4 242 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 OGFOD3Q6PK18 319 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 TAF8Q7Z7C8 310 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 PHLDB2Q86SQ0 1253 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 NOP9Q86U38 636 aaKnown RBP9.15□□□□□ -0.94
SYNE2-209ENST00000553308 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 FAM46DQ8NEK8 389 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 CCL4L1Q8NHW4 92 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 GPT2Q8TD30 523 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 PMEPA1Q969W9 287 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 HMCESQ96FZ2 354 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM168Q9H0V1 697 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 EPN3Q9H201 632 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 RDH14Q9HBH5 336 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 RWDD2AQ9UIY3 292 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 MFHAS1Q9Y4C4 1052 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 FHOD1Q9Y613 1164 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 DGKBQ9Y6T7 804 aa9.15□□□□□ -0.94
SYNE2-209ENST00000553308 ZFC3H1O60293 1989 aaKnown RBP9.15□□□□□ -0.95
SYNE2-209ENST00000553308 SDK2Q58EX2 2172 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 TSPAN11A1L157 253 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 TMEM202A6NGA9 273 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ZSCAN5CA6NGD5 496 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 LSM8O95777 96 aaKnown RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 PLEKP08567 350 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 PNLIPP16233 465 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 CD82P27701 267 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 MMP12P39900 470 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 LIG3P49916 1009 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ARSDP51689 593 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 MAZP56270 477 aaKnown RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 KIAA1024LP59773 190 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 B4GALNT1Q00973 533 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ARHGEF7Q14155 803 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 AGERQ15109 404 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 UGP2Q16851 508 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 AMZ1Q400G9 498 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 CCDC14Q49A88 953 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 SPECC1LQ69YQ0 1117 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ARCQ7LC44 396 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ZSWIM9Q86XI8 627 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 PYROXD2Q8N2H3 581 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 MSANTD4Q8NCY6 345 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 RCBTB1Q8NDN9 531 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 OR56A4Q8NGH8 313 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ATL2Q8NHH9 583 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 JOSD2Q8TAC2 188 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ZNF564Q8TBZ8 553 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 RXFP2Q8WXD0 754 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms