RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PTPN3P26045 913 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 MAT2AP31153 395 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 POLR2LP62875 67 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 IRX4P78413 519 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 OTUD4Q01804 1114 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ITKQ08881 620 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 CCDC173Q0VFZ6 552 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TRAF2Q12933 501 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 GRIK2Q13002 908 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 KLF1Q13351 362 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ZNF211Q13398 564 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TMEM52BQ4KMG9 183 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 SEL1L2Q5TEA6 688 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 AADACL2Q6P093 401 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ZC3H18Q86VM9 953 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 PAF1Q8N7H5 531 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TMEM145Q8NBT3 493 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 DENND6BQ8NEG7 585 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ARRDC2Q8TBH0 407 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ACTL9Q8TC94 416 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ASB12Q8WXK4 309 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 FEM1CQ96JP0 617 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 SERAC1Q96JX3 654 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 VAT1Q99536 393 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 CARD9Q9H257 536 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 SEPT10Q9P0V9 454 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ZFC3H1O60293 1989 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 COL5A1P20908 1838 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 A0A1W2PR77 199 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 TTC24A2A3L6 582 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 VILLO15195 856 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 PGLSO95336 258 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 PRLRP16471 622 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CD38P28907 300 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 AKT2P31751 481 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 TEX44Q53QW1 395 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 ARMC12Q5T9G4 340 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 IL27RAQ6UWB1 636 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 DPPA4Q7L190 304 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 IQCHQ86VS3 1027 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CDKL3Q8IVW4 592 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CNTD1Q8N815 330 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CXorf40AQ8TE69 158 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 HTR3CQ8WXA8 447 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 SKA1Q96BD8 255 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 IMP4Q96G21 291 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 MCCC1Q96RQ3 725 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 FERMT1Q9BQL6 677 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 C1QTNF7Q9BXJ2 289 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 C1QTNF2Q9BXJ5 285 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC17A9Q9BYT1 436 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CEP41Q9BYV8 373 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 AASDHPPTQ9NRN7 309 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 RXFP3Q9NSD7 469 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 PCDHGC4Q9Y5F7 938 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 RAI2Q9Y5P3 530 aa11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-209ENST00000552896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 A0A1B0GVT2 93 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 CFAP69A5D8W1 941 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 H7C0C1 242 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC31A1O15431 190 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 FZD6O60353 706 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 GDF9O60383 454 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 CER1O95813 267 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 MMP2P08253 660 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 C6P13671 934 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 SDHBP21912 280 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 CD86P42081 329 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 ATP5OP48047 213 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 CSNK1EP49674 416 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 EIF3EP60228 445 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 RPL26P61254 145 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 SKOR1P84550 965 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 NIPAL4Q0D2K0 466 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 OVGP1Q12889 678 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 RALGDSQ12967 914 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 FGL2Q14314 439 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 LAYNQ6UX15 382 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 KYAT3Q6YP21 454 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 USP45Q70EL2 814 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 MINDY1Q8N5J2 469 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 MFSD2AQ8NA29 543 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 FAM174AQ8TBP5 190 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 TADA1Q96BN2 335 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 TEKT5Q96M29 485 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 AGAP3Q96P47 875 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 LENG8Q96PV6 779 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 WRAP53Q9BUR4 548 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms