RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 HCAR2Q8TDS4 363 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 RXFP2Q8WXD0 754 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 CASKIN2Q8WXE0 1202 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 COL26A1Q96A83 441 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC3Q9BQI4 270 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 MBNL1Q9NR56 388 aaKnown RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 METTL5Q9NRN9 209 aaKnown RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 DNAI1Q9UI46 699 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 PADI4Q9UM07 663 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC187A0A096LP49 1063 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 TMCO5BA8MYB1 307 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 CASC3O15234 703 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ANXA6P08133 673 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 BLKP51451 505 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 HDAC4P56524 1084 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 PPARDQ03181 441 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 RAD51Q06609 339 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 PTP4A2Q12974 167 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 CLN3Q13286 438 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 C1orf61Q13536 156 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 LY6DQ14210 128 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 TMEM52BQ4KMG9 183 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ATXN7L2Q5T6C5 722 aaPredicted RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 FAXCQ5TGI0 409 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 HGSNATQ68CP4 663 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ESRP1Q6NXG1 681 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 CRTC1Q6UUV9 634 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 MON1BQ7L1V2 547 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 PHLDB2Q86SQ0 1253 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ARL10Q8N8L6 244 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 NTAN1Q96AB6 310 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 TBC1D31Q96DN5 1066 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 MED8Q96G25 268 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 GDAP1L1Q96MZ0 367 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 EPAS1Q99814 870 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 MAGEB5Q9BZ81 275 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 CPEB1Q9BZB8 566 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 NOL6Q9H6R4 1146 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ZNHIT6Q9NWK9 470 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 ACSL6Q9UKU0 697 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 PCDHGA7Q9Y5G6 932 aa11.97□□□□□ -0.49
CKAP4-202ENST00000552828 TDRD6O60522 2096 aaKnown RBP11.97□□□□□ -0.49
CKAP4-202ENST00000552828 BOD1L1Q8NFC6 3051 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 TSPAN11A1L157 253 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 DDX3XO00571 662 aaKnown RBP eCLIP11.96□□□□□ -0.493e-12■■■□□ 18.9
CKAP4-202ENST00000552828 BUB1O43683 1085 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 TMCC1O94876 653 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 TNFSF15O95150 251 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 FTLP02792 175 aaPredicted RBP11.96□□□□□ -0.49
CKAP4-202ENST00000552828 KRT3P12035 628 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 ITIH2P19823 946 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 ZNF75DP51815 510 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 HK3P52790 923 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.49
CKAP4-202ENST00000552828 EIF3IQ13347 325 aaKnown RBP11.96□□□□□ -0.49
CKAP4-202ENST00000552828 SPIDRQ14159 915 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 AGERQ15109 404 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 ELOCQ15369 112 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 CDO1Q16878 200 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC81Q6ZN84 652 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 MCOLN2Q8IZK6 566 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC185Q8N715 623 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 C3orf20Q8ND61 904 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 JOSD2Q8TAC2 188 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 SCG3Q8WXD2 468 aaKnown RBP11.96□□□□□ -0.49
CKAP4-202ENST00000552828 MRFAP1L1Q96HT8 127 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 SELENOOQ9BVL4 669 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 TAS2R14Q9NYV8 317 aa11.96□□□□□ -0.49
CKAP4-202ENST00000552828 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.49
CKAP4-202ENST00000552828 ANKRD62A6NC57 917 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 SIGLEC16A6NMB1 481 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 AKR1B15C9JRZ8 316 aaPredicted RBP11.95□□□□□ -0.5
CKAP4-202ENST00000552828 PLD2O14939 933 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 EFSO43281 561 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 IGSF6O95976 241 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
CKAP4-202ENST00000552828 ALPIP09923 528 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 YBEYP58557 167 aaPredicted RBP11.95□□□□□ -0.5
CKAP4-202ENST00000552828 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 LRRC14Q15048 493 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 IRF4Q15306 451 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 ALG11Q2TAA5 492 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 WSCD2Q2TBF2 565 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 LRRC73Q5JTD7 316 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 DNAJC24Q6P3W2 148 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 RTL3Q8N8U3 475 aaKnown RBP11.95□□□□□ -0.5
CKAP4-202ENST00000552828 KYQ8NBH2 561 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 OR6C4Q8NGE1 309 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 FAM172AQ8WUF8 416 aa11.95□□□□□ -0.5
CKAP4-202ENST00000552828 TRIM11Q96F44 468 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms