RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 LIFP15018 202 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 RRM1P23921 792 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 CD82P27701 267 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 MXI1P50539 228 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ATP1A2P50993 1020 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 NEK3P51956 506 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 THOP1P52888 689 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 MLLT10P55197 1068 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 OXCT1P55809 520 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 RIPPLY3P57055 190 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 PFN3P60673 137 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ELOAQ14241 798 aaKnown RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 STK38Q15208 465 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 PHF19Q5T6S3 580 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SYPL2Q5VXT5 272 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 KRT39Q6A163 491 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 KIAA1161Q6NSJ0 714 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 FBXL22Q6P050 247 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 INTS8Q75QN2 995 aaKnown RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 CCNJLQ8IV13 435 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 FAM186BQ8IYM0 893 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ARL10Q8N8L6 244 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ATP11CQ8NB49 1132 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 TMIEQ8NEW7 156 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 OR2A12Q8NGT7 310 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SPATA32Q96LK8 384 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 CCDC114Q96M63 670 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 CMKLR1Q99788 373 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 HDAC8Q9BY41 377 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SLC13A1Q9BZW2 595 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 MIS12Q9H081 205 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 TNKS2Q9H2K2 1166 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SRA1Q9HD15 236 aaKnown RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 EXOC1Q9NV70 894 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 GPR34Q9UPC5 381 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 DAAM1Q9Y4D1 1078 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 FADS3Q9Y5Q0 445 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 MORC2Q9Y6X9 1032 aaPredicted RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 ANKRD36A6QL64 1941 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SYNJ2BP-COX16A0A087WUM0 186 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PRR19A6NJB7 356 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ZNF891A8MT65 544 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 KCNU1A8MYU2 1149 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 STMND1H3BQB6 276 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 M0QYT0 321 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 MAPK13O15264 365 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 POLR2DO15514 142 aaKnown RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 CALUO43852 315 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 LEFTY1O75610 366 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ENDOD1O94919 500 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 FBXO21O94952 628 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 TRUB2O95900 331 aaKnown RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 CALCAP01258 141 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 VDRP11473 427 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 CCL4P13236 92 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ADRB3P13945 408 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 POU3F2P20265 443 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 NR1D1P20393 614 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 GNLYP22749 145 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 NR2F2P24468 414 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 IGFALSP35858 605 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 RECQLP46063 649 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 NASPP49321 788 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PITX1P78337 314 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 GPLD1P80108 840 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PPARDQ03181 441 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PLAURQ03405 335 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ZFP36L1Q07352 338 aaKnown RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 KLRB1Q12918 225 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 CUL2Q13617 745 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PTK2BQ14289 1009 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 C16orf72Q14CZ0 275 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 LACTB2Q53H82 288 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 RABGAP1LQ5R372 815 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 FHL5Q5TD97 284 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 TMEM164Q5U3C3 297 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 TTC39BQ5VTQ0 682 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 C22orf39Q6P5X5 142 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 SHC4Q6S5L8 630 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 LCLAT1Q6UWP7 414 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 LINGO4Q6UY18 593 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 DPY19L3Q6ZPD9 716 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 RD3Q7Z3Z2 195 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 TMPRSS9Q7Z410 1059 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ZDHHC13Q8IUH4 622 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 HID1Q8IV36 788 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 SLITRK4Q8IW52 837 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 AGGF1Q8N302 714 aaeCLIP5.45□□□□□ -1.542e-7■■■□□ 16.1
HOXB3-213ENST00000552000 FSTL5Q8N475 847 aaPredicted RBP5.45□□□□□ -1.54
HOXB3-213ENST00000552000 ATP6V0D2Q8N8Y2 350 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 LINC00301Q8NCQ3 95 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 FBXL13Q8NEE6 735 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 SSC4DQ8WTU2 575 aa5.45□□□□□ -1.54
HOXB3-213ENST00000552000 TMEM174Q8WUU8 243 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms