RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 INPP5DQ92835 1189 aa11.74□□□□□ -0.53
TROAP-215ENST00000551245 ACDQ96AP0 544 aa11.74□□□□□ -0.53
TROAP-215ENST00000551245 SLC7A6OSQ96CW6 309 aaPredicted RBP11.74□□□□□ -0.53
TROAP-215ENST00000551245 IFT43Q96FT9 208 aa11.74□□□□□ -0.53
TROAP-215ENST00000551245 KIAA1522Q9P206 1035 aaPredicted RBP11.74□□□□□ -0.53
TROAP-215ENST00000551245 CCL26Q9Y258 94 aa11.74□□□□□ -0.53
TROAP-215ENST00000551245 ACTL7AQ9Y615 435 aa11.74□□□□□ -0.53
TROAP-215ENST00000551245 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 H0Y3Z8 333 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 SCAMP3O14828 347 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 CSPG5O95196 566 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 NDST3O95803 873 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PDHA1P08559 390 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 HADHAP40939 763 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ETV4P43268 484 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 RGRP47804 291 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 USP4Q13107 963 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 BMPR2Q13873 1038 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ZNF77Q15935 545 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 DUSP6Q16828 381 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 HSP90AA5PQ58FG0 334 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 TSTD2Q5T7W7 516 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 MROH9Q5TGP6 573 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 METTL3Q86U44 580 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 SLC25A41Q8N5S1 370 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 C2orf49Q9BVC5 232 aaPredicted RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 TXNDC16Q9P2K2 825 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 SLC17A6Q9P2U8 582 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 LHX3Q9UBR4 397 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 VPS51Q9UID3 782 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 CCDC195A0A1B0GUA6 201 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 GOLGA8RI6L899 631 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 SNAP91O60641 907 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 GJB3O75712 270 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 DCTN3O75935 186 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 TMCC1O94876 653 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 CBX6O95503 412 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 CYBBP04839 570 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ARNTP27540 789 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 CRHR1P34998 444 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 RASSF2P50749 326 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 LIMK2P53671 638 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ACVR1Q04771 509 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PDK4Q16654 411 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 STRA8Q7Z7C7 330 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 LMNTD2Q8IXW0 634 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 TTC8Q8TAM2 541 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 OTUB2Q96DC9 234 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 NSMCE3Q96MG7 304 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 KLF6Q99612 283 aaPredicted RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 VPS11Q9H270 941 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 SCUBE2Q9NQ36 999 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 TBC1D14Q9P2M4 693 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 COPEO14579 308 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 TIMM44O43615 452 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ENTPD5O75356 428 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 ALDOAP04075 364 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 ATP6V1C1P21283 382 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PSMA3P25788 255 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PTDSS1P48651 473 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 CSNK1DP48730 415 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 POLD2P49005 469 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 KCNC3Q14003 757 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 RETSATQ6NUM9 610 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 LVRNQ6Q4G3 990 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 KDELC2Q7Z4H8 507 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 GRASPQ7Z6J2 395 aaPredicted RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 RIN3Q8TB24 985 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 IARS2Q9NSE4 1012 aaKnown RBP11.73□□□□□ -0.53
TROAP-215ENST00000551245 IL1RAPL1Q9NZN1 696 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 GRID1Q9ULK0 1009 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PLLPQ9Y342 182 aa11.73□□□□□ -0.53
TROAP-215ENST00000551245 PER2O15055 1255 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 UGP2Q16851 508 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 NCEH1Q6PIU2 408 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 GALNT7Q86SF2 657 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
TROAP-215ENST00000551245 LRRC8CQ8TDW0 803 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 C2orf16Q68DN1 1984 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 SLC7A4O43246 635 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 LDB2O43679 373 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 EDF1O60869 148 aaKnown RBP11.72□□□□□ -0.53
TROAP-215ENST00000551245 CSRP3P50461 194 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 SCNN1BP51168 640 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 NTHL1P78549 312 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 LMAN2Q12907 356 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 CNGA3Q16281 694 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 TAF1BQ53T94 588 aaPredicted RBP11.72□□□□□ -0.53
TROAP-215ENST00000551245 WASHC2DQ5SRD0 308 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 KIAA0408Q6ZU52 694 aa11.72□□□□□ -0.53
TROAP-215ENST00000551245 APCDD1Q8J025 514 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms