RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 KCTD6Q8NC69 237 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 ECHDC3Q96DC8 303 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 TRIM5Q9C035 493 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 KLF15Q9UIH9 416 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 ATP8A1Q9Y2Q0 1164 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 NBEAQ8NFP9 2946 aa24.54■■□□□ 1.52
PXN-217ENST00000550795 TRAFD1O14545 582 aaPredicted RBP24.53■■□□□ 1.52
PXN-217ENST00000550795 FFAR2O15552 330 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 SIGLEC6O43699 453 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 MFSD11O43934 449 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 MMP12P39900 470 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 LIG3P49916 1009 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 RENBPP51606 427 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 ZNF235Q14590 738 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 ANKRD20A8PQ5CZ79 823 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 NCBP2-AS2Q69YL0 99 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 CNGA4Q8IV77 575 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 MDM1Q8TC05 714 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 IFT43Q96FT9 208 aa24.53■■□□□ 1.52
PXN-217ENST00000550795 MAP3K6O95382 1288 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 GIMD1P0DJR0 217 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 C6P13671 934 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 CR2P20023 1033 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 ACADVLP49748 655 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 MAXP61244 160 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 AP1S1P61966 158 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 ERAP2Q6P179 960 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 NOD2Q9HC29 1040 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 PCDHGC4Q9Y5F7 938 aa24.52■■□□□ 1.52
PXN-217ENST00000550795 CACNA1GO43497 2377 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 CSF2P04141 144 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 KRT7P08729 469 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 MAN1A1P33908 653 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 CLDN6P56747 220 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 RALGDSQ12967 914 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 EIF2B5Q13144 721 aaKnown RBP24.51■■□□□ 1.51
PXN-217ENST00000550795 CAMK2BQ13554 666 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 PAFAH1B3Q15102 231 aaKnown RBP24.51■■□□□ 1.51
PXN-217ENST00000550795 PDK2Q15119 407 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 IRF4Q15306 451 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 WSCD2Q2TBF2 565 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 PROX2Q3B8N5 592 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 PARGQ86W56 976 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 PAF1Q8N7H5 531 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 TC2NQ8N9U0 490 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 LRRN4Q8WUT4 740 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 RAPGEF5Q92565 580 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 C1QTNF7Q9BXJ2 289 aa24.51■■□□□ 1.51
PXN-217ENST00000550795 PNMA8BQ9ULN7 279 aaPredicted RBP24.51■■□□□ 1.51
PXN-217ENST00000550795 FAM149AA5PLN7 773 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 A8MX80 341 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 NEBLO76041 1014 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 NME1P15531 152 aaKnown RBP24.5■■□□□ 1.51
PXN-217ENST00000550795 MMP13P45452 471 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 GALNT2Q10471 571 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 ZNF211Q13398 564 aaPredicted RBP24.5■■□□□ 1.51
PXN-217ENST00000550795 LRRC14Q15048 493 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 SMAD1Q15797 465 aaKnown RBP24.5■■□□□ 1.51
PXN-217ENST00000550795 MARC1Q5VT66 337 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 PQLC3Q8N755 202 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 OR4C6Q8NH72 309 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 NUDCD1Q96RS6 583 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 MGME1Q9BQP7 344 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 ZNF670Q9BS34 389 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 RBSNQ9H1K0 784 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 SCUBE2Q9NQ36 999 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 LCMT1Q9UIC8 334 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 PCDHGA1Q9Y5H4 931 aa24.5■■□□□ 1.51
PXN-217ENST00000550795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 LZTS3O60299 673 aaPredicted RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 CKMT2P17540 419 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 HSPA9P38646 679 aaKnown RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 GARSP41250 739 aaKnown RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 THOP1P52888 689 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 HNRNPKP61978 463 aaKnown RBP eCLIP24.49■■□□□ 1.51
PXN-217ENST00000550795 ZFYVE27Q5T4F4 411 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 MAP7D3Q8IWC1 876 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 ZNF548Q8NEK5 533 aaPredicted RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 NSMCE1Q8WV22 266 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 FAF2Q96CS3 445 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 TCEAL2Q9H3H9 227 aaPredicted RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 CCDC86Q9H6F5 360 aaKnown RBP24.49■■□□□ 1.51
PXN-217ENST00000550795 NT5MQ9NPB1 228 aa24.49■■□□□ 1.51
PXN-217ENST00000550795 HTRA2O43464 458 aaPredicted RBP24.48■■□□□ 1.51
PXN-217ENST00000550795 RFPL3O75679 317 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 MTA2O94776 668 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 MYF5P13349 255 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 JUNDP17535 347 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 KDELR1P24390 212 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 KNTC1P50748 2209 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 YPEL5P62699 121 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 POLR2LP62875 67 aaKnown RBP24.48■■□□□ 1.51
PXN-217ENST00000550795 GBE1Q04446 702 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 SLC10A2Q12908 348 aaPredicted RBP24.48■■□□□ 1.51
PXN-217ENST00000550795 TRAF2Q12933 501 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 LIPIQ6XZB0 460 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 LRRC49Q8IUZ0 686 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 RHOT2Q8IXI1 618 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 RBFAQ8N0V3 343 aa24.48■■□□□ 1.51
PXN-217ENST00000550795 BBS5Q8N3I7 341 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms