RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-217ENST00000550483 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
CACNB3-217ENST00000550483 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
CACNB3-217ENST00000550483 SLC27A6Q9Y2P4 619 aa12.66□□□□□ -0.38
CACNB3-217ENST00000550483 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
CACNB3-217ENST00000550483 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 COPEO14579 308 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 FZD6O60353 706 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 GPR37L1O60883 481 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 MPOP05164 745 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ATP5BP06576 529 aaKnown RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 GSTA1P08263 222 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ERVK-10P10266 1014 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 POLR2EP19388 210 aaKnown RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 MTHFRP42898 656 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 CHRNA4P43681 627 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ARCN1P48444 511 aaKnown RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 PRAMEP78395 509 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ECT2LQ008S8 904 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 BCL2L1Q07817 233 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 DHCR24Q15392 516 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 AAK1Q2M2I8 961 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 EML3Q32P44 896 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 HSP90AA5PQ58FG0 334 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 FAM78AQ5JUQ0 283 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 FAM182AQ5T1J6 154 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 STRA8Q7Z7C7 330 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 TRIM42Q8IWZ5 723 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 C12orf76Q8N812 135 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ZNF641Q96N77 438 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 CPEB1Q9BZB8 566 aaKnown RBP12.65□□□□□ -0.38
CACNB3-217ENST00000550483 MAGEE1Q9HCI5 957 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 DCDC2Q9UHG0 476 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 WNT6Q9Y6F9 365 aa12.65□□□□□ -0.38
CACNB3-217ENST00000550483 A0A1W2PPM1 405 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 GMNCA6NCL1 334 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 SCAMP3O14828 347 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 HTRA2O43464 458 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 LDB2O43679 373 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 GLRA3O75311 464 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 VAPBO95292 243 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 GLP2RO95838 553 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 CYP17A1P05093 508 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 SRCP12931 536 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 OGNP20774 298 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 CRHR1P34998 444 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 RGRP47804 291 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 DGKGP49619 791 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 EPHB1P54762 984 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 HYAL1Q12794 435 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 ADAM15Q13444 863 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 FUT11Q495W5 492 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 TCEAL5Q5H9L2 206 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 HHATQ5VTY9 493 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 MRNIPQ6NTE8 343 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 ESRP1Q6NXG1 681 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 C22orf39Q6P5X5 142 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 RGS9BPQ6ZS82 235 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 GLT6D1Q7Z4J2 308 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 C4orf33Q8N1A6 199 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 CPA6Q8N4T0 437 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 C2CD4AQ8NCU7 369 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 GPR150Q8NGU9 434 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 RIN3Q8TB24 985 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 DENND1AQ8TEH3 1009 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 BHMTQ93088 406 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 MYO19Q96H55 970 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 LRIG1Q96JA1 1093 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 MAGEB18Q96M61 343 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 IARS2Q9NSE4 1012 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 PLK2Q9NYY3 685 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 MID2Q9UJV3 735 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 INTS6Q9UL03 887 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 ANKRD6Q9Y2G4 727 aa12.64□□□□□ -0.39
CACNB3-217ENST00000550483 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
CACNB3-217ENST00000550483 HEPACAM2A8MVW5 462 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 WASH3PC4AMC7 463 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 RFPL1O75677 317 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 PGLSO95336 258 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 ASMTLO95671 621 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 POP4O95707 220 aaKnown RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 FAM107AO95990 144 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 COL6A2P12110 1019 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 LPOP22079 712 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
CACNB3-217ENST00000550483 MAGEA12P43365 314 aa12.63□□□□□ -0.39
CACNB3-217ENST00000550483 CD151P48509 253 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms