RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GDPD4Q6W3E5 623 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 EFL1Q7Z2Z2 1120 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 TTC7BQ86TV6 843 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 FAM72BQ86X60 149 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 OR6K2Q8NGY2 324 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 JOSD2Q8TAC2 188 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 WDR48Q8TAF3 677 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 ENOX1Q8TC92 643 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 MAPK15Q8TD08 544 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GPT2Q8TD30 523 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 LMX1AQ8TE12 382 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 SLC20A1Q8WUM9 679 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 NAT6Q93015 286 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 IL12RB2Q99665 862 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 C11orf70Q9BRQ4 267 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 BOCQ9BWV1 1114 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 C1QTNF7Q9BXJ2 289 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 TTYH3Q9C0H2 523 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 NUP62CLQ9H1M0 184 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GANQ9H2C0 597 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 THSD1Q9NS62 852 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 SAMSN1Q9NSI8 373 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 SPASTQ9UBP0 616 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 DKK3Q9UBP4 350 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 APOBEC3BQ9UH17 382 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 DNAI1Q9UI46 699 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GGT7Q9UJ14 662 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 ITM2BQ9Y287 266 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 MFHAS1Q9Y4C4 1052 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 ACTL7AQ9Y615 435 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 TDRD6O60522 2096 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 DOCK9Q9BZ29 2069 aa7.71□□□□□ -1.17
NEK3-201ENST00000550331 FAM170AA1A519 330 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 LMO7DNF2Z398 122 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 TM7SF2O76062 418 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 TMCC1O94876 653 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 IGSF6O95976 241 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 TPM2P07951 284 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PLEKP08567 350 aaPredicted RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 KRT3P12035 628 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 KRT10P13645 584 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 CHRNB2P17787 502 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 TGM2P21980 687 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 IGFALSP35858 605 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 STAT1P42224 750 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 NSFP46459 744 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 CSRP3P50461 194 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PEX5P50542 639 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 SUOXP51687 545 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 AIF1P55008 147 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 YBEYP58557 167 aaPredicted RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 POLR2FP61218 127 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 SRSF1Q07955 248 aaKnown RBP eCLIP7.71□□□□□ -1.18
NEK3-201ENST00000550331 PTP4A2Q12974 167 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 CDKN3Q16667 212 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 DEFB133Q30KQ1 61 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PARP15Q460N3 678 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 RAB6CQ53S08 254 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PRRT3Q5FWE3 981 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 MACC1Q6ZN28 852 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 RBM44Q6ZP01 1051 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PHF13Q86YI8 300 aaPredicted RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 PHACTR4Q8IZ21 702 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 CCDC185Q8N715 623 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 RTL3Q8N8U3 475 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 C3orf20Q8ND61 904 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 CXorf40AQ8TE69 158 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 FAM172AQ8WUF8 416 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 SNRNP27Q8WVK2 155 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 KCNE4Q8WWG9 221 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 GLMNQ92990 594 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 KLHL32Q96NJ5 620 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 LRRC61Q9BV99 259 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 DPH1Q9BZG8 443 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 RAB6CQ9H0N0 254 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 NOL6Q9H6R4 1146 aaKnown RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 FAM207AQ9NSI2 230 aaPredicted RBP7.71□□□□□ -1.18
NEK3-201ENST00000550331 TAB2Q9NYJ8 693 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 CHMP5Q9NZZ3 219 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 PCDHGA8Q9Y5G5 932 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 COL12A1Q99715 3063 aa7.71□□□□□ -1.18
NEK3-201ENST00000550331 AHCTF1Q8WYP5 2266 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 TSPAN11A1L157 253 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CPED1A4D0V7 1026 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SIGLEC16A6NMB1 481 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 TMEM110-MUSTN1A8MSY1 372 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 WASH4PA8MWX3 477 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 EPHB6O15197 1021 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 KLK10O43240 276 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 BUB1O43683 1085 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CALB1P05937 261 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ANXA6P08133 673 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 GPD1P21695 349 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 EPHB2P29323 1055 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms