RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 FAM45AQ8TCE6 357 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 SEMA3CQ99985 751 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 MRPL46Q9H2W6 279 aaKnown RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 ARL8BQ9NVJ2 186 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 LHX3Q9UBR4 397 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 TLK1Q9UKI8 766 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 SCN8AQ9UQD0 1980 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 CHUKO15111 745 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 URODP06132 367 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 MRPL19P49406 292 aaKnown RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 CLCN4P51793 760 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 CMPK2Q5EBM0 449 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 NAPRTQ6XQN6 538 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 DCAF4L2Q8NA75 395 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 RHEBL1Q8TAI7 183 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 VOPP1Q96AW1 172 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 KLHL5Q96PQ7 755 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 TBC1D10AQ9BXI6 508 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 C1QTNF3Q9BXJ4 246 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 ALG13Q9NP73 1137 aaKnown RBP10.04□□□□□ -0.8
RAB5B-206ENST00000549505 IL23AQ9NPF7 189 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 IL1RAPL1Q9NZN1 696 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 HACD3Q9P035 362 aa10.04□□□□□ -0.8
RAB5B-206ENST00000549505 NUP205Q92621 2012 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 H0YHG0 523 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 CCND1P24385 295 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 SLC8A1P32418 973 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TAS2R39P59534 338 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ARF5P84085 180 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 MPP1Q00013 466 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 HERC3Q15034 1050 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 LRRC26Q2I0M4 334 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ARID3BQ8IVW6 561 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 DENND6AQ8IWF6 608 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TMEM169Q96HH4 297 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 MIPEPQ99797 713 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TRMOQ9BU70 441 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 GATA5Q9BWX5 397 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 NMUR2Q9GZQ4 415 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TAGLN3Q9UI15 199 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 PPIL1Q9Y3C6 166 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 A0A0D9SEW6 157 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 RBP1P09455 135 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 HOXA9P31269 272 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 SGSHP51688 502 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 PTPN5P54829 565 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 AQP5P55064 265 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ARPP19P56211 112 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF177Q13360 481 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 PIWIL4Q7Z3Z4 852 aaKnown RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 FSTL5Q8N475 847 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TTC30BQ8N4P2 665 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 PPP4R1Q8TF05 950 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF512Q96ME7 567 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 CYP2S1Q96SQ9 504 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF334Q9HCZ1 680 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 MRPL17Q9NRX2 175 aaKnown RBP10.03□□□□□ -0.8
RAB5B-206ENST00000549505 SLC39A10Q9ULF5 831 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 DNAJC16Q9Y2G8 782 aa10.03□□□□□ -0.8
RAB5B-206ENST00000549505 A0A0G2JND7 137 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 GSC2O15499 205 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 KLK8O60259 260 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 DLX3O60479 287 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 LUC7L3O95232 432 aaKnown RBP10.02□□□□□ -0.8
RAB5B-206ENST00000549505 CRTAMO95727 393 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 ATP5F1P24539 256 aaPredicted RBP10.02□□□□□ -0.8
RAB5B-206ENST00000549505 INHBCP55103 352 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 TWF1Q12792 350 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 PRKAA1Q13131 559 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF235Q14590 738 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 DLG2Q15700 870 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 ZNF470Q6ECI4 717 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 TMPRSS6Q8IU80 811 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 SLC41A1Q8IVJ1 513 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 DTX3LQ8TDB6 740 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 USP13Q92995 863 aaPredicted RBP10.02□□□□□ -0.8
RAB5B-206ENST00000549505 FAR2Q96K12 515 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 CAB39LQ9H9S4 337 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 EBF2Q9HAK2 575 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.8
RAB5B-206ENST00000549505 HTRA2O43464 458 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 RHOCP08134 193 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 LTA4HP09960 611 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ITGB8P26012 769 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 TARSP26639 723 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CPOXP36551 454 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 MAPK8P45983 427 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 STC1P52823 247 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 AP1S1P61966 158 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 DEFB103AP81534 67 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 HECTD2Q5U5R9 776 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms