RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 FKBP15Q5T1M5 1219 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 ERAP2Q6P179 960 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 PHLDB2Q86SQ0 1253 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 GKN2Q86XP6 184 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 PYROXD2Q8N2H3 581 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 HMCESQ96FZ2 354 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 TUBGCP5Q96RT8 1024 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 PCDHB18PQ96TA0 734 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 VPS16Q9H269 839 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 SUV39H2Q9H5I1 410 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 UBA2Q9UBT2 640 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-218ENST00000548945 FZD10Q9ULW2 581 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 DGKBQ9Y6T7 804 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 HECTD1Q9ULT8 2610 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-218ENST00000548945 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CFAP69A5D8W1 941 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 D6RAR5 112 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 PLD2O14939 933 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 EPHB6O15197 1021 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CCP110O43303 1012 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CELA2BP08218 269 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 DESP17661 470 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 ITIH2P19823 946 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 MMP12P39900 470 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CSNK1DP48730 415 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 KLK7P49862 253 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 NDST2P52849 883 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CLN3Q13286 438 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 MTM1Q13496 603 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 INPP5AQ14642 412 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CYTH1Q15438 398 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CCDC81Q6ZN84 652 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 HID1Q8IV36 788 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 KYQ8NBH2 561 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 MED8Q96G25 268 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CCNL2Q96S94 520 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 CNPY3Q9BT09 278 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 APOOQ9BUR5 198 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 STRADBQ9C0K7 418 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 GULP1Q9UBP9 304 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 ATXN7L1Q9ULK2 861 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-218ENST00000548945 GPR34Q9UPC5 381 aa12.96□□□□□ -0.33
PTCH1-218ENST00000548945 PTPN13Q12923 2485 aa12.96□□□□□ -0.34
PTCH1-218ENST00000548945 FLNCQ14315 2725 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 PMS2P1A4D2B8 440 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 B8ZZF3 427 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 INSIG1O15503 277 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 CREB3O43889 395 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 PIGNO95427 931 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-218ENST00000548945 PNLIPP16233 465 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 CCKBRP32239 447 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 LIG3P49916 1009 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 SYCP1Q15431 976 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 DNAJC24Q6P3W2 148 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 SCYL2Q6P3W7 929 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 FOXR1Q6PIV2 292 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 ENPP7Q6UWV6 458 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 RAB11FIP2Q7L804 512 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 FBXO39Q8N4B4 442 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 GPR156Q8NFN8 814 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-218ENST00000548945 CCDC74AQ96AQ1 378 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 WDR92Q96MX6 357 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 TMEM74Q96NL1 305 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 RBM15Q96T37 977 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTCH1-218ENST00000548945 SEMA4CQ9C0C4 833 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 ATP13A3Q9H7F0 1226 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
PTCH1-218ENST00000548945 KLQ9UEF7 1012 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 APPL1Q9UKG1 709 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 COQ6Q9Y2Z9 468 aa12.95□□□□□ -0.34
PTCH1-218ENST00000548945 TNFRSF10CO14798 259 aa12.94□□□□□ -0.34
PTCH1-218ENST00000548945 NVLO15381 856 aaKnown RBP12.94□□□□□ -0.34
PTCH1-218ENST00000548945 TNFP01375 233 aa12.94□□□□□ -0.34
PTCH1-218ENST00000548945 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
PTCH1-218ENST00000548945 UGT1A5P35504 534 aa12.94□□□□□ -0.34
PTCH1-218ENST00000548945 INHBCP55103 352 aa12.94□□□□□ -0.34
PTCH1-218ENST00000548945 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
PTCH1-218ENST00000548945 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms