RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 C1QTNF7Q9BXJ2 289 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 PISDQ9UG56 409 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 PCCBP05166 539 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 ITIH1P19827 911 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 PTPN9P43378 593 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 INHBCP55103 352 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 PTP4A2Q12974 167 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 INPP5AQ14642 412 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 NFATC4Q14934 902 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 TMEM52BQ4KMG9 183 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 STRADAQ7RTN6 431 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 VASH2Q86V25 355 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 RTL3Q8N8U3 475 aaKnown RBP16.61■□□□□ 0.25
SSH1-208ENST00000548522 Q8N9G6 341 aaPredicted RBP16.61■□□□□ 0.25
SSH1-208ENST00000548522 CENPIQ92674 756 aaPredicted RBP16.61■□□□□ 0.25
SSH1-208ENST00000548522 EXTL1Q92935 676 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 FUBP1Q96AE4 644 aaKnown RBP16.61■□□□□ 0.25
SSH1-208ENST00000548522 STK33Q9BYT3 514 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 GANQ9H2C0 597 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 PCDH12Q9NPG4 1184 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
SSH1-208ENST00000548522 DKK3Q9UBP4 350 aa16.61■□□□□ 0.25
SSH1-208ENST00000548522 LRP4O75096 1905 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 RELNP78509 3460 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 RASA4BC9J798 803 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 EPHB6O15197 1021 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 RASA4O43374 803 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 RASGRP1O95267 797 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 WISP1O95388 367 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 ALPIP09923 528 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 CTSEP14091 401 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 WT1P19544 449 aaPredicted RBP16.6■□□□□ 0.25
SSH1-208ENST00000548522 EPHB2P29323 1055 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 RFC1P35251 1148 aaPredicted RBP16.6■□□□□ 0.25
SSH1-208ENST00000548522 ETV5P41161 510 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 BLKP51451 505 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 SRP54P61011 504 aaKnown RBP16.6■□□□□ 0.25
SSH1-208ENST00000548522 CDR2Q01850 454 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 KCNC4Q03721 635 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 CYTH1Q15438 398 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 TMPRSS9Q7Z410 1059 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 FAM114A1Q8IWE2 563 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 PLA2G15Q8NCC3 412 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 OR1E3Q8WZA6 343 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 NTAN1Q96AB6 310 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 PCDHB18PQ96TA0 734 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 APOOQ9BUR5 198 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 LRRN3Q9H3W5 708 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 TAB2Q9NYJ8 693 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 FOXJ2Q9P0K8 574 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 KLQ9UEF7 1012 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 MFHAS1Q9Y4C4 1052 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 LOXL2Q9Y4K0 774 aa16.6■□□□□ 0.25
SSH1-208ENST00000548522 SPENQ96T58 3664 aaKnown RBP16.59■□□□□ 0.25
SSH1-208ENST00000548522 PRAMEF33A0A0G2JMD5 474 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 TSPAN11A1L157 253 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 ZSCAN5CA6NGD5 496 aaPredicted RBP16.59■□□□□ 0.25
SSH1-208ENST00000548522 TOR1BO14657 336 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 PRAMEF10O60809 474 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 FAM87AP0C7U9 286 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 CCKBRP32239 447 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 MMP12P39900 470 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 LIG3P49916 1009 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 PEX5P50542 639 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 EIF3IQ13347 325 aaKnown RBP16.59■□□□□ 0.25
SSH1-208ENST00000548522 LVRNQ6Q4G3 990 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 CCNJLQ8IV13 435 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 GPR156Q8NFN8 814 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 SCG3Q8WXD2 468 aaKnown RBP16.59■□□□□ 0.25
SSH1-208ENST00000548522 RBM15Q96T37 977 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSH1-208ENST00000548522 NCAPGQ9BPX3 1015 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 STRADBQ9C0K7 418 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 FGF22Q9HCT0 170 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 MRPL40Q9NQ50 206 aaKnown RBP16.59■□□□□ 0.25
SSH1-208ENST00000548522 ACSL6Q9UKU0 697 aa16.59■□□□□ 0.25
SSH1-208ENST00000548522 TMEM202A6NGA9 273 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 CCP110O43303 1012 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 CREB3O43889 395 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
SSH1-208ENST00000548522 JMJD7P0C870 316 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 XPAP23025 273 aaPredicted RBP16.58■□□□□ 0.24
SSH1-208ENST00000548522 HTR1BP28222 390 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 RGRP47804 291 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 CYP4F2P78329 520 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 RAD51Q06609 339 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 ELP6Q0PNE2 266 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 SERINC3Q13530 473 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 UGP2Q16851 508 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 INO80DQ53TQ3 878 aaPredicted RBP16.58■□□□□ 0.24
SSH1-208ENST00000548522 USP53Q70EK8 1073 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 GKN2Q86XP6 184 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 SGF29Q96ES7 293 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 WDR92Q96MX6 357 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 RETREG1Q9H6L5 497 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms