RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 DMXL2Q8TDJ6 3036 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 LRRK1Q38SD2 2015 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 BTNL10A8MVZ5 291 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 NEMP1O14524 444 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 PIAS2O75928 621 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CAPNS1P04632 268 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 ITGAVP06756 1048 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 HOXC4P09017 264 aaPredicted RBP15.43■□□□□ 0.06
SSH1-204ENST00000546697 ITIH2P19823 946 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 DGKAP23743 735 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 IGFALSP35858 605 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 MMP13P45452 471 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 SCNN1BP51168 640 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 SLC10A2Q12908 348 aaPredicted RBP15.43■□□□□ 0.06
SSH1-204ENST00000546697 BNIP3Q12983 259 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 ILKQ13418 452 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 ZNF235Q14590 738 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 MESDQ14696 234 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 PROX2Q3B8N5 592 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 PRAMEF14Q5SWL7 426 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 ERAP2Q6P179 960 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 PARGQ86W56 976 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 RAVER1Q8IY67 606 aaKnown RBP15.43■□□□□ 0.06
SSH1-204ENST00000546697 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 FAM181AQ8N9Y4 354 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CXorf40AQ8TE69 158 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CNTNAP3BQ96NU0 1288 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 OLFM3Q96PB7 478 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CALN1Q9BXU9 219 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CNTNAP3Q9BZ76 1288 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 KCTD5Q9NXV2 234 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 CACNA1BQ00975 2339 aa15.43■□□□□ 0.06
SSH1-204ENST00000546697 MAP1BP46821 2468 aaKnown RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 MMP20O60882 483 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 ATXN1LP0C7T5 689 aaKnown RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 C6P13671 934 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 GM2AP17900 193 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 TRIM23P36406 574 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 MAGEA1P43355 309 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 HNRNPKP61978 463 aaKnown RBP eCLIP15.42■□□□□ 0.06
SSH1-204ENST00000546697 GBE1Q04446 702 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 PPIDQ08752 370 aaKnown RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 FOXC1Q12948 553 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 ZNF211Q13398 564 aaPredicted RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 SMAD1Q15797 465 aaKnown RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 WSCD2Q2TBF2 565 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 TPRG1LQ5T0D9 272 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 C11orf63Q6NUN7 778 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 LIPIQ6XZB0 460 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 TMPRSS7Q7RTY8 843 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 GATAD2AQ86YP4 633 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 TMTC1Q8IUR5 882 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 RHOT1Q8IXI2 618 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 OR4C6Q8NH72 309 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 NSMCE1Q8WV22 266 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 IL12RB2Q99665 862 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 NOD2Q9HC29 1040 aa15.42■□□□□ 0.06
SSH1-204ENST00000546697 DDX56Q9NY93 547 aaKnown RBP15.42■□□□□ 0.06
SSH1-204ENST00000546697 TMEM110-MUSTN1A8MSY1 372 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PSMD11O00231 422 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PSTPIP1O43586 416 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 HYAL3O43820 417 aaPredicted RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 TOP3BO95985 862 aaKnown RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 KCNA4P22459 653 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 ACP1P24666 158 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 TEAD1P28347 426 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 CDC25BP30305 580 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 SSR1P43307 286 aaKnown RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 ACADVLP49748 655 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 LIG3P49916 1009 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 IFI35P80217 286 aaPredicted RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 IL9RQ01113 521 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 TRAF2Q12933 501 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 MTM1Q13496 603 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PTK2BQ14289 1009 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 IHHQ14623 411 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 MACC1Q6ZN28 852 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 KDF1Q8NAX2 398 aaPredicted RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 ARRDC2Q8TBH0 407 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 SCRN2Q96FV2 425 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 POLR1EQ9GZS1 481 aaKnown RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 BRD8Q9H0E9 1235 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 USP29Q9HBJ7 922 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 MBNL1Q9NR56 388 aaKnown RBP15.41■□□□□ 0.06
SSH1-204ENST00000546697 FTSJ1Q9UET6 329 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PHTF1Q9UMS5 762 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PCDHA13Q9Y5I0 950 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 PTPRBP23467 1997 aa15.41■□□□□ 0.06
SSH1-204ENST00000546697 TMEM8BA6NDV4 472 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 ENC1O14682 589 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 TPP1O14773 563 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 SCAMP1O15126 338 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 NDUFA10O95299 355 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 PGLSO95336 258 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 LDOC1O95751 146 aaPredicted RBP15.4■□□□□ 0.06
SSH1-204ENST00000546697 ZFXP17010 805 aaPredicted RBP15.4■□□□□ 0.06
SSH1-204ENST00000546697 CKMT2P17540 419 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 COMTP21964 271 aa15.4■□□□□ 0.06
SSH1-204ENST00000546697 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms