RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 AGAP3Q96P47 875 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GCNAQ96QF7 691 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CDRT15Q96T59 188 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MMP19Q99542 508 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 HOPXQ9BPY8 73 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 DDX50Q9BQ39 737 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 FDXACB1Q9BRP7 624 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 C1QTNF1Q9BXJ1 281 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ANKRD60Q9BZ19 345 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 OSBPL2Q9H1P3 480 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TASP1Q9H6P5 420 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MINDY3Q9H8M7 445 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MEAF6Q9HAF1 191 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ZFYVE1Q9HBF4 777 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PALMDQ9NP74 551 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SPAG4Q9NPE6 437 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PFDN4Q9NQP4 134 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CNGB3Q9NQW8 809 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ENTPD7Q9NQZ7 604 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 C20orf96Q9NUD7 363 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ARMC1Q9NVT9 282 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CHCHD3Q9NX63 227 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CLIC5Q9NZA1 410 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM9Q9P0T7 183 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 RSL24D1Q9UHA3 163 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ITGB1BP2Q9UKP3 347 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 AKT3Q9Y243 479 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MYRFQ9Y2G1 1151 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 AP4S1Q9Y587 144 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CSADQ9Y600 493 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PSAT1Q9Y617 370 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PTCH2Q9Y6C5 1203 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 FER1L6Q2WGJ9 1857 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ZSWIM8A7E2V4 1837 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 LOC100653049A0A140TA62 436 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TRIM64A6NGJ6 449 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 EIF4E1BA6NMX2 242 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 AIM2O14862 343 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FGF10O15520 208 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 HNRNPRO43390 633 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 GRID2O43424 1007 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 HUS1O60921 280 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TRMUO75648 421 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 KRT34O76011 436 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PAPSS2O95340 614 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PIGNO95427 931 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 LGALS2P05162 132 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 THBS1P07996 1170 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ERVK-10P10266 1014 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 IMPDH2P12268 514 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 STMN1P16949 149 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF26P17031 533 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 XRCC1P18887 633 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CCNCP24863 283 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TKTP29401 623 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 LRPAP1P30533 357 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ARRB2P32121 409 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 MLH1P40692 756 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 GRIA1P42261 906 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 GRIA2P42262 883 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SOX9P48436 509 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CD151P48509 253 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CLCN5P51795 746 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 GEMP55040 296 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TPI1P60174 286 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 RAB10P61026 200 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PSME3P61289 254 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 HPCAP84074 193 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ARHGAP1Q07960 439 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SFSWAPQ12872 951 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 MTM1Q13496 603 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 USP10Q14694 798 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SNX17Q15036 470 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CCDC85BQ15834 202 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SLC14A2Q15849 920 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FAM83EQ2M2I3 478 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 KIZQ2M2Z5 673 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SOWAHAQ2M3V2 549 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 NADK2Q4G0N4 442 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ARL13AQ5H913 290 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 KIAA0930Q6ICG6 404 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 LRRC8EQ6NSJ5 796 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TIGD7Q6NT04 549 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PPP4R4Q6NUP7 873 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PKN3Q6P5Z2 889 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FBXL19Q6PCT2 694 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 KLHDC10Q6PID8 442 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FIGNL1Q6PIW4 674 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 DCLRE1AQ6PJP8 1040 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 MAMDC4Q6UXC1 1216 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 RBM44Q6ZP01 1051 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PRR23BQ6ZRT6 265 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FASTKD5Q7L8L6 764 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 EFL1Q7Z2Z2 1120 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SATL1Q86VE3 508 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CARM1Q86X55 608 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF354CQ86Y25 554 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CHERPQ8IWX8 916 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 DEFB106AQ8N104 65 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SIX6OS1Q8N1H7 587 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms