RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CROCCQ5TZA2 2017 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 CDC14CA4D256 554 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 A8MU76 341 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 MAPK13O15264 365 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 KLRC4O43908 158 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 ZMPSTE24O75844 475 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 UGT2B4P06133 528 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 KRT13P13646 458 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 TIMP2P16035 220 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 SERPINH1P50454 418 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 RAB15P59190 212 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 LRRC14Q15048 493 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 CNGA2Q16280 664 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 TFAP2DQ7Z6R9 452 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 TTC7BQ86TV6 843 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 PCDH20Q8N6Y1 951 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 DCAF4L2Q8NA75 395 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 CXorf40AQ8TE69 158 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 PATE1Q8WXA2 126 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 WDR92Q96MX6 357 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 KLHL32Q96NJ5 620 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 C1QTNF7Q9BXJ2 289 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 MFRPQ9BY79 579 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 FGF22Q9HCT0 170 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 RCOR3Q9P2K3 495 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 KIAA1257Q9ULG3 409 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 TMEM184BQ9Y519 407 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 PCDHB3Q9Y5E6 796 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 DGKBQ9Y6T7 804 aa15.52■□□□□ 0.08
CLSTN3-216ENST00000545663 ANKHD1Q8IWZ3 2542 aaKnown RBP15.52■□□□□ 0.07
CLSTN3-216ENST00000545663 KRIT1O00522 736 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 PAGE1O75459 146 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 CBX6O95503 412 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 FGF1P05230 155 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 NR2F2P24468 414 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 CCR1P32246 355 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 DLSTP36957 453 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 MXI1P50539 228 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 MC2RQ01718 297 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 LRMPQ12912 555 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 NR1D2Q14995 579 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 ZXDCQ2QGD7 858 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 C5orf22Q49AR2 442 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 SNAP47Q5SQN1 464 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 ANKRD40Q6AI12 368 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 BEND5Q7L4P6 421 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 C17orf82Q86X59 251 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 PLA2G15Q8NCC3 412 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 ZNF396Q96N95 335 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 TEFMQ96QE5 360 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 CEP44Q9C0F1 390 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 ANLNQ9NQW6 1124 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 DDIT4Q9NX09 232 aa15.51■□□□□ 0.07
CLSTN3-216ENST00000545663 SVILO95425 2214 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 CHD5Q8TDI0 1954 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 PPM1DO15297 605 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 POLR2DO15514 142 aaKnown RBP15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 KATNA1O75449 491 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 ECEL1O95672 775 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 DLGAP3O95886 979 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 CD160O95971 181 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 BMP6P22004 513 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 GTF2H1P32780 548 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 PGDP52209 483 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 YWHAZP63104 245 aaKnown RBP15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 ARF5P84085 180 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 CLPPQ16740 277 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 JMJD6Q6NYC1 403 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 TMEM270Q6UE05 265 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 SLC29A3Q9BZD2 475 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 POPDC2Q9HBU9 364 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 MPP6Q9NZW5 540 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 CROTQ9UKG9 612 aa15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 ARHGEF17Q96PE2 2063 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-216ENST00000545663 IGHV1OR21-1A0A087WYE8 117 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CALUO43852 315 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 F13A1P00488 732 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 PCCBP05166 539 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 SLC2A3P11169 496 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 LEPRP48357 1165 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 RPL34P49207 117 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CHAF1BQ13112 559 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 SHC4Q6S5L8 630 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 NRROSQ86YC3 692 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 ZNF683Q8IZ20 524 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 RANBP9Q96S59 729 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 SLC4A5Q9BY07 1137 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 TWSG1Q9GZX9 223 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 SUDS3Q9H7L9 328 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 CFAP45Q9UL16 551 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 TRAF3IP3Q9Y228 551 aa15.49■□□□□ 0.07
CLSTN3-216ENST00000545663 PIPSLA2A3N6 862 aa15.48■□□□□ 0.07
CLSTN3-216ENST00000545663 I6L893 689 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-216ENST00000545663 ZNF28P17035 718 aa15.48■□□□□ 0.07
CLSTN3-216ENST00000545663 PSMC2P35998 433 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-216ENST00000545663 GPD2P43304 727 aa15.48■□□□□ 0.07
CLSTN3-216ENST00000545663 NME3Q13232 169 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms