RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZMPSTE24O75844 475 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 WISP1O95388 367 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 MT-CO1P00395 513 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PRNPP04156 253 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 CTSLP07711 333 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PLEKP08567 350 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 GZMAP12544 262 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 TNFAIP3P21580 790 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 L1CAMP32004 1257 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 HTR7P34969 479 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RECQLP46063 649 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RPL7AP62424 266 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 BNC1Q01954 994 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SLC20A2Q08357 652 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 CCDC15Q0P6D6 951 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 INPP5AQ14642 412 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 NR1I3Q14994 352 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 HLA-BQ31612 363 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 E4F1Q66K89 784 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PLEKHA7Q6IQ23 1121 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RWDD4Q6NW29 188 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 DCUN1D2Q6PH85 259 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SHISA2Q6UWI4 295 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 LINGO4Q6UY18 593 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SLFN11Q7Z7L1 901 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 LUZP1Q86V48 1076 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 TRIM69Q86WT6 500 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 HID1Q8IV36 788 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 NAXDQ8IW45 347 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 DRC7Q8IY82 874 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PCDH20Q8N6Y1 951 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RTL3Q8N8U3 475 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RNF214Q8ND24 703 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 TMIEQ8NEW7 156 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 OR2A12Q8NGT7 310 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 OR14C36Q8NHC7 312 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 FNIP1Q8TF40 1166 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PPP1R16AQ96I34 528 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SLC6A18Q96N87 628 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 NAP1L5Q96NT1 182 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 EIF3CQ99613 913 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 ACE2Q9BYF1 805 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 TRIM55Q9BYV6 548 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 WNT10AQ9GZT5 417 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 MAGEH1Q9H213 219 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 HAUS4Q9H6D7 363 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 GAREM1Q9H706 876 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PREBQ9HCU5 417 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PARVAQ9NVD7 372 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 TAS2R14Q9NYV8 317 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 CRIM1Q9NZV1 1036 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SARDHQ9UL12 918 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 HIF3AQ9Y2N7 669 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 PCDHGB2Q9Y5G2 931 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 KNTC1P50748 2209 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1W2PQJ5 194 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ZSCAN5CA6NGD5 496 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FAM72CH0Y354 149 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 GOLGA6L19H0YKK7 550 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 K7ERQ8 282 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 TMPRSS2O15393 492 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FGF10O15520 208 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FLRT2O43155 660 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DFNA5O60443 496 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 RTN2O75298 545 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF821O75541 412 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ATE1O95260 518 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 HTR3BO95264 441 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DLGAP3O95886 979 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 MYBL1P10243 752 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 GLDCP23378 1020 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ITGB7P26010 798 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CHRNA3P32297 505 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 PBX1P40424 430 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CTSKP43235 329 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CSNK1EP49674 416 aaKnown RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CCT8P50990 548 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 METAP1P53582 386 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 PPP2CBP62714 309 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 PPP2CAP67775 309 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 OGDHQ02218 1023 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 KLHL30Q0D2K2 578 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CNTN1Q12860 1018 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 MAMLD1Q13495 774 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 KIF19Q2TAC6 998 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SETMARQ53H47 684 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SLC45A4Q5BKX6 768 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 PIP5KL1Q5T9C9 394 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FAM72AQ5TYM5 149 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 NAPEPLDQ6IQ20 393 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FAM72DQ6L9T8 149 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 NEK5Q6P3R8 708 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF571Q7Z3V5 609 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 TMC6Q7Z403 805 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ADAT2Q7Z6V5 191 aaKnown RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FAM72BQ86X60 149 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 AGGF1Q8N302 714 aaeCLIP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 BAHD1Q8TBE0 780 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms