RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 PRAMEP78395 509 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 FRG1Q14331 258 aaKnown RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 ADCY4Q8NFM4 1077 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 DGCR14Q96DF8 476 aaKnown RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 PGAP3Q96FM1 320 aaPredicted RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 SLC29A1Q99808 456 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 CAAP1Q9H8G2 361 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 DSEQ9UL01 958 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 NEU3Q9UQ49 428 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 SMIM31A0A1B0GVY4 71 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 PIRTP0C851 137 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 UGT1A6P19224 532 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 CCNCP24863 283 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 CD86P42081 329 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 HERC6Q8IVU3 1022 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 C2CD4AQ8NCU7 369 aaPredicted RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 PLEKHG4BQ96PX9 1271 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 LIN28AQ9H9Z2 209 aaKnown RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 BCAP29Q9UHQ4 241 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 CDH9Q9ULB4 789 aa17.03■□□□□ 0.32
SEC23A-203ENST00000545328 HEMK1Q9Y5R4 338 aaPredicted RBP17.03■□□□□ 0.32
SEC23A-203ENST00000545328 H3BSA7 217 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.32
SEC23A-203ENST00000545328 MRASO14807 208 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 ZSCAN9O15535 394 aaPredicted RBP17.02■□□□□ 0.32
SEC23A-203ENST00000545328 IPO13O94829 963 aaKnown RBP17.02■□□□□ 0.32
SEC23A-203ENST00000545328 PSMC3P17980 439 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 PAMP19021 973 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 PCSK6P29122 969 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 TPP2P29144 1249 aaPredicted RBP17.02■□□□□ 0.32
SEC23A-203ENST00000545328 SLC7A2P52569 658 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 GEMP55040 296 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 ADAM17P78536 824 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 MAP7Q14244 749 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 TRIM25Q14258 630 aaKnown RBP17.02■□□□□ 0.32
SEC23A-203ENST00000545328 KIF19Q2TAC6 998 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 TECRLQ5HYJ1 363 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 TICAM1Q8IUC6 712 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 TTC16Q8NEE8 873 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 OR10T2Q8NGX3 314 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
SEC23A-203ENST00000545328 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 J3KR12 359 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 MATN3O15232 486 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 ITGB1P05556 798 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 ARSDP51689 593 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.31
SEC23A-203ENST00000545328 PELI3Q8N2H9 469 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 TMIGD2Q96BF3 282 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 RPL10LQ96L21 214 aaKnown RBP17.02■□□□□ 0.31
SEC23A-203ENST00000545328 C3orf30Q96M34 536 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 EGFL7Q9UHF1 273 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 IPO11Q9UI26 975 aaKnown RBP17.02■□□□□ 0.31
SEC23A-203ENST00000545328 AURKCQ9UQB9 309 aa17.02■□□□□ 0.31
SEC23A-203ENST00000545328 NYNRINQ9P2P1 1898 aaKnown RBP17.02■□□□□ 0.31
SEC23A-203ENST00000545328 HEATR9A2RTY3 570 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 FAM149AA5PLN7 773 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 NPHS1O60500 1241 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 SIX3O95343 332 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-203ENST00000545328 PIM1P11309 404 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-203ENST00000545328 COL6A2P12110 1019 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 DSC2Q02487 901 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 CNTN4Q8IWV2 1026 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 ASB9Q96DX5 294 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 TREX1Q9NSU2 369 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 MARCH4Q9P2E8 410 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-203ENST00000545328 MIA3Q5JRA6 1907 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 ARHGEF37A1IGU5 675 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 SAC3D1A6NKF1 404 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 PLOD2O00469 737 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 NR5A2O00482 541 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 IRAK2O43187 625 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 GRIK1P39086 918 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 GRIA3P42263 894 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 PRKAA2P54646 552 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 INHBCP55103 352 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 CDKN2DP55273 166 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 CDH15P55291 814 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 HERC3Q15034 1050 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 LRRC23Q53EV4 343 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-203ENST00000545328 POTEHQ6S545 545 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 TMEM207Q6UWW9 146 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 MAELQ96JY0 434 aaKnown RBP17.01■□□□□ 0.31
SEC23A-203ENST00000545328 TMEM79Q9BSE2 394 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 PTCH2Q9Y6C5 1203 aa17.01■□□□□ 0.31
SEC23A-203ENST00000545328 HNRNPRO43390 633 aaKnown RBP17■□□□□ 0.31
SEC23A-203ENST00000545328 AKAP10O43572 662 aa17■□□□□ 0.31
SEC23A-203ENST00000545328 LTA4HP09960 611 aaKnown RBP17■□□□□ 0.31
SEC23A-203ENST00000545328 ZNF26P17031 533 aaPredicted RBP17■□□□□ 0.31
SEC23A-203ENST00000545328 CHRM3P20309 590 aa17■□□□□ 0.31
SEC23A-203ENST00000545328 PCSK1P29120 753 aa17■□□□□ 0.31
SEC23A-203ENST00000545328 ADRA1AP35348 466 aa17■□□□□ 0.31
SEC23A-203ENST00000545328 SCNN1BP51168 640 aa17■□□□□ 0.31
SEC23A-203ENST00000545328 YBX1P67809 324 aaKnown RBP17■□□□□ 0.31
SEC23A-203ENST00000545328 HECTD2Q5U5R9 776 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms