RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 HSF2BPO75031 334 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 PAGE1O75459 146 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 STK17BO94768 372 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 YEATS4O95619 227 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 DLGAP3O95886 979 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 EPB41P11171 864 aaKnown RBP7.34□□□□□ -1.23
COPA-207ENST00000545284 CCNB1P14635 433 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 TRIM23P36406 574 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 DNA2P51530 1060 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 SNX16P57768 344 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 BIRC2Q13490 618 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 SEMA5AQ13591 1074 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 IRF4Q15306 451 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 INPP5JQ15735 1006 aaPredicted RBP7.34□□□□□ -1.23
COPA-207ENST00000545284 WSCD2Q2TBF2 565 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 BRMS1LQ5PSV4 323 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 ANKS6Q68DC2 871 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 WDR74Q6RFH5 385 aaPredicted RBP7.34□□□□□ -1.23
COPA-207ENST00000545284 SHC4Q6S5L8 630 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 LINGO4Q6UY18 593 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 GDPD4Q6W3E5 623 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 CEP57L1Q8IYX8 460 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 NRSN1Q8IZ57 195 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 GUF1Q8N442 669 aaKnown RBP7.34□□□□□ -1.23
COPA-207ENST00000545284 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 ZSWIM1Q9BR11 485 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 GSDMCQ9BYG8 508 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 ZDHHC6Q9H6R6 413 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 FAM204AQ9H8W3 233 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 TRNAU1APQ9NX07 287 aaKnown RBP7.34□□□□□ -1.23
COPA-207ENST00000545284 ARHGEF38Q9NXL2 777 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 KCTD5Q9NXV2 234 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 TMEM63CQ9P1W3 806 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 MFHAS1Q9Y4C4 1052 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 RPS6KL1Q9Y6S9 549 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 DOCK9Q9BZ29 2069 aa7.34□□□□□ -1.23
COPA-207ENST00000545284 MED13Q9UHV7 2174 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ITPR3Q14573 2671 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 B4DGG1 531 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 AGRPO00253 132 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 POLR1CO15160 346 aaPredicted RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 MED7O43513 233 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 DPM1O60762 260 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ENDOD1O94919 500 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 CBX6O95503 412 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ADCY5O95622 1261 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 F9P00740 461 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 UGT2B4P06133 528 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 NR1D1P20393 614 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 BMP6P22004 513 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ITGA3P26006 1051 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 CASP1P29466 404 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 IRAK1P51617 712 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 PGDP52209 483 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 GCNT1Q02742 428 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ILF3Q12906 894 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPA-207ENST00000545284 GRM3Q14832 879 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 MYLK3Q32MK0 819 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ALFQ53S48 1182 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ARHGAP22Q7Z5H3 698 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 FAM129CQ86XR2 697 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ZNF683Q8IZ20 524 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 UNC5BQ8IZJ1 945 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ZDHHC1Q8WTX9 485 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 CASKIN2Q8WXE0 1202 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ARHGEF2Q92974 986 aaKnown RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 CCDC47Q96A33 483 aaKnown RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 PGAP3Q96FM1 320 aaPredicted RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 PDXPQ96GD0 296 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 SIK2Q9H0K1 926 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 TMEM168Q9H0V1 697 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 WDCPQ9H6R7 721 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ATP13A1Q9HD20 1204 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 MRPL40Q9NQ50 206 aaKnown RBP7.33□□□□□ -1.24
COPA-207ENST00000545284 OCIAD1Q9NX40 245 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 USP25Q9UHP3 1055 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ITM2BQ9Y287 266 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 ZNF451Q9Y4E5 1061 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 SDK2Q58EX2 2172 aa7.33□□□□□ -1.24
COPA-207ENST00000545284 CRYBG3Q68DQ2 2970 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 NYNRINQ9P2P1 1898 aaKnown RBP7.32□□□□□ -1.24
COPA-207ENST00000545284 UNC13CQ8NB66 2214 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 F8P00451 2351 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 ZSCAN5CA6NGD5 496 aaPredicted RBP7.32□□□□□ -1.24
COPA-207ENST00000545284 E5RJQ4 531 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 KRIT1O00522 736 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 CETN3O15182 167 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 CREG1O75629 220 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 CD160O95971 181 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 FGF1P05230 155 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 SYT1P21579 422 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 FASLGP48023 281 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 CXCR3P49682 368 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 NDST2P52849 883 aa7.32□□□□□ -1.24
COPA-207ENST00000545284 PER3P56645 1201 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms