RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LDOC1O95751 146 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 CD48P09326 243 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 CA4P22748 312 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 KDELR1P24390 212 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 MMP12P39900 470 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 PEX5P50542 639 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 TAS2R40P59535 323 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 FAM193AP78312 1265 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 IL9RQ01113 521 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 SLC10A7Q0GE19 358 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 COL9A2Q14055 689 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 FGL2Q14314 439 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 LRRC14Q15048 493 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 NCBP2-AS2Q69YL0 99 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 RAB44Q7Z6P3 723 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 TXLNBQ8N3L3 684 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 TEX26Q8N6G2 289 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 BTN2A2Q8WVV5 523 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 CENPTQ96BT3 561 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 BMFQ96LC9 184 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 DUSP23Q9BVJ7 150 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 POLR1EQ9GZS1 481 aaKnown RBP11.9□□□□□ -0.5
HDAC4-216ENST00000544989 BRD8Q9H0E9 1235 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 WASF3Q9UPY6 502 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 ITM2BQ9Y287 266 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 BPTFQ12830 3046 aa11.9□□□□□ -0.5
HDAC4-216ENST00000544989 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 LRRD1A4D1F6 860 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 FAM221BA6H8Z2 402 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 TMEM8BA6NDV4 472 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 GOLGA6L6A8MZA4 724 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 SPINT1O43278 529 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 PSTPIP1O43586 416 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 MFSD11O43934 449 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 DKK1O94907 266 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 PEX11BO96011 259 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 ELFN1P0C7U0 828 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 CYP2A6P11509 494 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 CR2P20023 1033 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 HTR1BP28222 390 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 RGRP47804 291 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 THOP1P52888 689 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 CLDN2P57739 230 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 PFN3P60673 137 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 ILKQ13418 452 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 SHBQ15464 509 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 ATP13A4Q4VNC1 1196 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 PRAMEF14Q5SWL7 426 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 GATAD2AQ86YP4 633 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 MAML1Q92585 1016 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 HDAC11Q96DB2 347 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 CNDP2Q96KP4 475 aaKnown RBP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 TBATAQ96M53 351 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 RNF157Q96PX1 679 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 DNPEPQ9ULA0 475 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 PHTF1Q9UMS5 762 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 BTBD3Q9Y2F9 522 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDAC4-216ENST00000544989 MSRB2Q9Y3D2 182 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 CSNK1G3Q9Y6M4 447 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 TMEM131Q92545 1883 aa11.89□□□□□ -0.51
HDAC4-216ENST00000544989 MAST4O15021 2626 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 POM121BA6NF01 834 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 ENC1O14682 589 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 MUSKO15146 869 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 RAD51BO15315 384 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 CPP00450 1065 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 CSF2P04141 144 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 PROS1P07225 676 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 C6P13671 934 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 NME1P15531 152 aaKnown RBP11.88□□□□□ -0.51
HDAC4-216ENST00000544989 DGKAP23743 735 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 LIG3P49916 1009 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 BLKP51451 505 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-216ENST00000544989 PDE1CQ14123 709 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-216ENST00000544989 TFDP2Q14188 446 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 FZD2Q14332 565 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 PDK1Q15118 436 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 ARMC12Q5T9G4 340 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 ALG1LQ6GMV1 187 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 MACC1Q6ZN28 852 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 USP45Q70EL2 814 aa11.88□□□□□ -0.51
HDAC4-216ENST00000544989 DPPA4Q7L190 304 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms