RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 NSMCE4AQ9NXX6 385 aa8.25□□□□□ -1.09
AFF1-211ENST00000544085 DNMT3BQ9UBC3 853 aaKnown RBP8.25□□□□□ -1.09
AFF1-211ENST00000544085 SH3GLB1Q9Y371 365 aa8.25□□□□□ -1.09
AFF1-211ENST00000544085 A0A1W2PRQ8 180 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SRRM3A6NNA2 597 aaPredicted RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 GFRA2O00451 464 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 KLHL41O60662 606 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 KRT37O76014 449 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 HNRNPCP07910 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
AFF1-211ENST00000544085 CA4P22748 312 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 WEE1P30291 646 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SPARCL1Q14515 664 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 DUSP6Q16828 381 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 PCID2Q5JVF3 399 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 UBAP2Q5T6F2 1119 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 LRRC6Q86X45 466 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 CTAGE3PQ8IX95 158 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 OR7D4Q8NG98 312 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SH3RF2Q8TEC5 729 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 DDI1Q8WTU0 396 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SLC44A1Q8WWI5 657 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 ALKBH8Q96BT7 664 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 MTBPQ96DY7 904 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 OXNAD1Q96HP4 312 aaPredicted RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 SLC22A12Q96S37 553 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 WDR83Q9BRX9 315 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 DHRS4Q9BTZ2 278 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SFXN1Q9H9B4 322 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SYBUQ9NX95 663 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 PCDH10Q9P2E7 1040 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 USP1O94782 785 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 MGAT5Q09328 741 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SLC10A7Q0GE19 358 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 ILF2Q12905 390 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 CAMK1Q14012 370 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 TEAD2Q15562 447 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 IGSF11Q5DX21 431 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 NLRP9Q7RTR0 991 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 GOT1L1Q8NHS2 421 aaPredicted RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 NKX2-4Q9H2Z4 354 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SLC28A3Q9HAS3 691 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 PDFQ9HBH1 243 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 NKIRAS1Q9NYS0 192 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 POLG2Q9UHN1 485 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SMG5Q9UPR3 1016 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 YBX2Q9Y2T7 364 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 MRPS23Q9Y3D9 190 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 ARPC4-TTLL3A0A0A6YYG9 625 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 CCDC195A0A1B0GUA6 201 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 FAM159BA6NKW6 160 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 GREM1O60565 184 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 RFPL2O75678 378 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 ALDH1A2O94788 518 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SERPINF2P08697 491 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 PAMP19021 973 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 HOXD9P28356 352 aaPredicted RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 GRIA1P42261 906 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 WNT3AP56704 352 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SP140Q13342 867 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 DYNC1I2Q13409 638 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 RETSATQ6NUM9 610 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 KDELC1Q6UW63 502 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 PPM1NQ8N819 430 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 DCAF4L2Q8NA75 395 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SMG7Q92540 1137 aaKnown RBP8.24□□□□□ -1.09
AFF1-211ENST00000544085 WBP2Q969T9 261 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 MYEOVQ96EZ4 313 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 IFT43Q96FT9 208 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 SMC6Q96SB8 1091 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 ARNT2Q9HBZ2 717 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 TDP1Q9NUW8 608 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 EURLQ9NYK6 297 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 TXNDC16Q9P2K2 825 aa8.24□□□□□ -1.09
AFF1-211ENST00000544085 OBSL1O75147 1896 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 SHOX2O60902 331 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 PMPCBO75439 489 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 PAPLNO95428 1278 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 EPOP01588 193 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ADRA1AP35348 466 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MDH1P40925 334 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 DNAJC3Q13217 504 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 INO80DQ53TQ3 878 aaPredicted RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 KIAA1614Q5VZ46 1190 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MARK2Q7KZI7 788 aaKnown RBP8.23□□□□□ -1.09
AFF1-211ENST00000544085 CHPFQ8IZ52 775 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FEM1CQ96JP0 617 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 FKBP14Q9NWM8 211 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 VPS28Q9UK41 221 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 ITGB1BP2Q9UKP3 347 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 MKL2Q9ULH7 1088 aa8.23□□□□□ -1.09
AFF1-211ENST00000544085 HCFC2Q9Y5Z7 792 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms