RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.52■□□□□ 0.07
CHD4-210ENST00000544040 FAM47BQ8NA70 645 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 MCFD2Q8NI22 146 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 PNPT1Q8TCS8 783 aaKnown RBP15.52■□□□□ 0.07
CHD4-210ENST00000544040 TM6SF2Q9BZW4 377 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 MAPRE3Q9UPY8 281 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 HBS1LQ9Y450 684 aaKnown RBP15.52■□□□□ 0.07
CHD4-210ENST00000544040 RTN3O95197 1032 aaPredicted RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 CTPS1P17812 591 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 GALNTL5Q7Z4T8 443 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 C1GALT1C1Q96EU7 318 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PPP3R2Q96LZ3 170 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PDCD2LQ9BRP1 358 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 FAM172BPA6NC97 362 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 RFXANKO14593 260 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 CCNKO75909 580 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 AP2A2O94973 939 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 MAXP61244 160 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 STXBP1P61764 594 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 POLR2LP62875 67 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 CPSF6Q16630 551 aaKnown RBP eCLIP15.51■□□□□ 0.077e-10■□□□□ 10.9
CHD4-210ENST00000544040 SWI5Q1ZZU3 235 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 C6orf52Q5T4I8 152 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 SULT1C3Q6IMI6 304 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 SAMD9LQ8IVG5 1584 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 SPATA5L1Q9BVQ7 753 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 FAIM2Q9BWQ8 316 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 TDRD1Q9BXT4 1180 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 OAS3Q9Y6K5 1087 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 TRUB2O95900 331 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 PAEPP09466 180 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 EGFLAMQ63HQ2 1017 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 TOR3AQ9H497 397 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PFDN2Q9UHV9 154 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 ZNF180Q9UJW8 692 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 IRAK3Q9Y616 596 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 A0A0X1KG70 313 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 A0A1W2PPM1 405 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 AQP1P29972 269 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 CDK9P50750 372 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 SUZ12Q15022 739 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 ZFP69Q49AA0 526 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 POLLQ9UGP5 575 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PSME2Q9UL46 239 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 GMEB1Q9Y692 573 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 DDTLA6NHG4 134 aaPredicted RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 NR4A1P22736 598 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 SLC12A3P55017 1021 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 BNIP2Q12982 314 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 HKDC1Q2TB90 917 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 SPDYCQ5MJ68 293 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 POMZP3Q6PJE2 187 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 CCDC80Q76M96 950 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 GGA2Q9UJY4 613 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PSMD13Q9UNM6 376 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 CORO2BQ9UQ03 480 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 ABCC3O15438 1527 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 MYBL2P10244 700 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 GLRA2P23416 452 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PPP4CP60510 307 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PDK4Q16654 411 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 TRIM40Q6P9F5 258 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 AADATQ8N5Z0 425 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 ZFP28Q8NHY6 868 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 VAT1Q99536 393 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 INTS7Q9NVH2 962 aaKnown RBP15.51■□□□□ 0.07
CHD4-210ENST00000544040 ITGB1BP2Q9UKP3 347 aa15.51■□□□□ 0.07
CHD4-210ENST00000544040 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 TOP3BO95985 862 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 CCNB1P14635 433 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PPIL2Q13356 520 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PALB2Q86YC2 1186 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 SPPL2CQ8IUH8 684 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ERN1O75460 977 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 SLC7A2P52569 658 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ITPK1Q13572 414 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ITCHQ96J02 903 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 EXOC2Q96KP1 924 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 WDR12Q9GZL7 423 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 ABCC13Q9NSE7 274 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 MARCH2Q9P0N8 246 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ADGRE2Q9UHX3 823 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 ZNF221Q9UK13 617 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 SORCS3Q9UPU3 1222 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 EIF4BP23588 611 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 MFSD10Q14728 455 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PPM1LQ5SGD2 360 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 LIPMQ5VYY2 423 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 AFTPHQ6ULP2 937 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 CDH19Q9H159 772 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 XPR1Q9UBH6 696 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 RAP2CQ9Y3L5 183 aa15.5■□□□□ 0.07
CHD4-210ENST00000544040 PAPSS1O43252 624 aaPredicted RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 PTPN1P18031 435 aaKnown RBP15.5■□□□□ 0.07
CHD4-210ENST00000544040 S100GP29377 79 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms