RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ENGASEQ8NFI3 743 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 CREB3L4Q8TEY5 395 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 GDPD5Q8WTR4 605 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 NSUN4Q96CB9 384 aaKnown RBP3.39□□□□□ -1.87
USP28-210ENST00000542033 CLSTN3Q9BQT9 956 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 PHF7Q9BWX1 381 aaPredicted RBP3.39□□□□□ -1.87
USP28-210ENST00000542033 RANBP17Q9H2T7 1088 aaKnown RBP3.39□□□□□ -1.87
USP28-210ENST00000542033 GHITMQ9H3K2 345 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 VEZTQ9HBM0 779 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 EIF2B3Q9NR50 452 aaKnown RBP3.39□□□□□ -1.87
USP28-210ENST00000542033 HAUS2Q9NVX0 235 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 BEX4Q9NWD9 120 aaPredicted RBP3.39□□□□□ -1.87
USP28-210ENST00000542033 HIF1ANQ9NWT6 349 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 TBC1D29Q9UFV1 150 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 PCDHGB5Q9Y5G0 923 aa3.39□□□□□ -1.87
USP28-210ENST00000542033 TYW5A2RUC4 315 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 GAGE10A6NGK3 116 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 FAM90A8PA6NJQ4 464 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 AP3D1O14617 1153 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TNPO2O14787 897 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 LIASO43766 372 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 AHCYL1O43865 530 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TSPAN9O75954 239 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 CCNDBP1O95273 360 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 CLDN7O95471 211 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 FAM90A13PP0C7W8 464 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 FAM90A24PP0C7X0 464 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 FAM200BP0CF97 657 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 LAMP2P13473 410 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 HOXB2P14652 356 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 RFX2P48378 723 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TDO2P48775 406 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 BLKP51451 505 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 SELENOVP59797 346 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ROR2Q01974 943 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 PTP4A2Q12974 167 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 RUNX2Q13950 521 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TBCEQ15813 527 aaPredicted RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 DUSP6Q16828 381 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 MFSD4BQ5TF39 518 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 SNX30Q5VWJ9 437 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 KLHL10Q6JEL2 608 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 KLHL24Q6TFL4 600 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TMCO3Q6UWJ1 677 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 FAM83HQ6ZRV2 1179 aaPredicted RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 C9orf47Q6ZRZ4 202 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ENOSF1Q7L5Y1 443 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 MON1AQ86VX9 555 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ZDHHC17Q8IUH5 632 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 SAMD14Q8IZD0 417 aaPredicted RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 OR4N2Q8NGD1 307 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ETNPPLQ8TBG4 499 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TMEM170AQ8WVE7 144 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 ASB5Q8WWX0 329 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 RNF183Q96D59 192 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 SYNCQ9H7C4 482 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 MRPL44Q9H9J2 332 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 PLAC1Q9HBJ0 212 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 WDR6Q9NNW5 1121 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 BABAM1Q9NWV8 329 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 CWC25Q9NXE8 425 aaPredicted RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 SLC25A10Q9UBX3 287 aaPredicted RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 FZD10Q9ULW2 581 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 NAALADL1Q9UQQ1 740 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 SRPRBQ9Y5M8 271 aaKnown RBP3.38□□□□□ -1.87
USP28-210ENST00000542033 INSL5Q9Y5Q6 135 aa3.38□□□□□ -1.87
USP28-210ENST00000542033 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 A0A1W2PRQ8 180 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 OR6C75A6NL08 312 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TEX22C9J3V5 150 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 VWA5AO00534 786 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 STARD3NLO95772 234 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TPM3P06753 285 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TFPIP10646 304 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 HSPA5P11021 654 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 UBL4AP11441 157 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 SLC2A4P14672 509 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 ZNF8P17098 575 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 CTPS1P17812 591 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 EPHA8P29322 1005 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 GGT5P36269 586 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 MLH1P40692 756 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 SARNPP82979 210 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 EFNB1P98172 346 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 SLC18A2Q05940 514 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 GABPB1Q06547 395 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 ACVR2BQ13705 512 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 WTAPQ15007 396 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 RILPL1Q5EBL4 403 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 FSCBQ5H9T9 825 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 ZNF766Q5HY98 468 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 FNBP1LQ5T0N5 605 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 UBAP2Q5T6F2 1119 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 ATG9BQ674R7 924 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 C17orf99Q6UX52 265 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms