RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 DNAJC28Q9NX36 388 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 TRIM10Q9UDY6 481 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 SLC25A13Q9UJS0 675 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 SARDHQ9UL12 918 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 PPP2R2CQ9Y2T4 447 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 A0A1W2PQU0 124 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 MACROD2A1Z1Q3 448 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 NEMP2A6NFY4 417 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 K7ENP7 123 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 SLC7A4O43246 635 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 DAPK3O43293 454 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 RAMP2O60895 175 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 PIAS2O75928 621 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ERCC2P18074 760 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 TGM2P21980 687 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 KDELR1P24390 212 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 IL4RP24394 825 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 AKT2P31751 481 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 CSRP3P50461 194 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 NDST2P52849 883 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 CLDN2P57739 230 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 NFKB2Q00653 900 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 GNA12Q03113 381 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 DPYSL3Q14195 570 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 KRT81Q14533 505 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 CDKN3Q16667 212 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ISXQ2M1V0 245 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 AGBL4Q5VU57 503 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 INO80CQ6PI98 192 aaPredicted RBP8.82□□□□□ -1
CLSTN3-212ENST00000541770 NT5DC3Q86UY8 548 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 TRIM69Q86WT6 500 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 KATNAL2Q8IYT4 538 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 DCAF4L2Q8NA75 395 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 KCTD6Q8NC69 237 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 OR13H1Q8NG92 308 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ARHGEF2Q92974 986 aaKnown RBP8.82□□□□□ -1
CLSTN3-212ENST00000541770 ARRDC3Q96B67 414 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ATXN7L3BQ96GX2 97 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ZNF830Q96NB3 372 aaPredicted RBP8.82□□□□□ -1
CLSTN3-212ENST00000541770 PSMB7Q99436 277 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
CLSTN3-212ENST00000541770 MUC3BQ9H195 1237 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 NOL6Q9H6R4 1146 aaKnown RBP8.82□□□□□ -1
CLSTN3-212ENST00000541770 NDFIP2Q9NV92 336 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 KLHL11Q9NVR0 708 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 NLGN3Q9NZ94 848 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 IL17BQ9UHF5 180 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 DNAI1Q9UI46 699 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 GUCA1BQ9UMX6 200 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.82□□□□□ -1
CLSTN3-212ENST00000541770 HYOU1Q9Y4L1 999 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 PCDHA3Q9Y5H8 950 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 ZNF462Q96JM2 2506 aa8.82□□□□□ -1
CLSTN3-212ENST00000541770 COL27A1Q8IZC6 1860 aaPredicted RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 A0A0D9SEW6 157 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 CCDC66A2RUB6 948 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 LRRD1A4D1F6 860 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 C3orf70A6NLC5 250 aaPredicted RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 MIF4GDA9UHW6 222 aaKnown RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 C10orf142B7Z368 130 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 K7ESM1 405 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 KPNA3O00505 521 aaPredicted RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 ZSCAN12O43309 604 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 PALMO75781 387 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 TNFSF15O95150 251 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 PCDH8O95206 1070 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 GP1BAP07359 652 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 CD48P09326 243 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 GIMD1P0DJR0 217 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 CTNNA2P26232 953 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 CTNNA1P35221 906 aaKnown RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 SERPINB6P35237 376 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 GJC1P36383 396 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 SLC20A2Q08357 652 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 POLD3Q15054 466 aaPredicted RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 PARP15Q460N3 678 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 ANKRD20A8PQ5CZ79 823 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 ZFYVE27Q5T4F4 411 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 AFMIDQ63HM1 303 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 Q6ZVU0 165 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 EFL1Q7Z2Z2 1120 aaKnown RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 PEX26Q7Z412 305 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 PTAR1Q7Z6K3 402 aaPredicted RBP8.81□□□□□ -1
CLSTN3-212ENST00000541770 LURAP1LQ8IV03 231 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 ARL14Q8N4G2 192 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 OR7D4Q8NG98 312 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 EXD1Q8NHP7 514 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 RAPGEF5Q92565 580 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 SLC46A1Q96NT5 459 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 DUSP23Q9BVJ7 150 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 KLC2Q9H0B6 622 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 LRRC19Q9H756 370 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 PREBQ9HCU5 417 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 DYRK4Q9NR20 520 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 VPS28Q9UK41 221 aa8.81□□□□□ -1
CLSTN3-212ENST00000541770 AMFRQ9UKV5 643 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms