RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CRYMQ14894 314 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 ACCSLQ4AC99 568 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 FNDC3BQ53EP0 1204 aaKnown RBP28.01■■■□□ 2.07
CCM2-218ENST00000541586 DGKKQ5KSL6 1271 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 RETSATQ6NUM9 610 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 Q6ZS52 159 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 CHPFQ8IZ52 775 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 RIBC1Q8N443 379 aaPredicted RBP28.01■■■□□ 2.07
CCM2-218ENST00000541586 RPLP0P6Q8NHW5 317 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 ERLEC1Q96DZ1 483 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 ARNT2Q9HBZ2 717 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 NOD2Q9HC29 1040 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 CACNA2D2Q9NY47 1150 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 TBK1Q9UHD2 729 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 ASLP04424 464 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 POLBP06746 335 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 SERPINF2P08697 491 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 SCNN1BP51168 640 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 MAGOHP61326 146 aaKnown RBP28.01■■■□□ 2.07
CCM2-218ENST00000541586 ST8SIA6P61647 398 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 ZNF234Q14588 700 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 PTPRNQ16849 979 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 TRMT10BQ6PF06 316 aaKnown RBP28.01■■■□□ 2.07
CCM2-218ENST00000541586 PAFAH2Q99487 392 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 STMN4Q9H169 189 aaPredicted RBP28.01■■■□□ 2.07
CCM2-218ENST00000541586 RPS6KL1Q9Y6S9 549 aa28.01■■■□□ 2.07
CCM2-218ENST00000541586 MAGEB16A2A368 324 aa28■■■□□ 2.07
CCM2-218ENST00000541586 K7ERQ8 282 aa28■■■□□ 2.07
CCM2-218ENST00000541586 NNMTP40261 264 aa28■■■□□ 2.07
CCM2-218ENST00000541586 CES3Q6UWW8 571 aa28■■■□□ 2.07
CCM2-218ENST00000541586 CYP4X1Q8N118 509 aa28■■■□□ 2.07
CCM2-218ENST00000541586 SLC25A41Q8N5S1 370 aa28■■■□□ 2.07
CCM2-218ENST00000541586 ZNF366Q8N895 744 aa28■■■□□ 2.07
CCM2-218ENST00000541586 FAM76AQ8TAV0 307 aa28■■■□□ 2.07
CCM2-218ENST00000541586 DHRS4Q9BTZ2 278 aa28■■■□□ 2.07
CCM2-218ENST00000541586 MOCS1Q9NZB8 636 aa28■■■□□ 2.07
CCM2-218ENST00000541586 THAP10Q9P2Z0 257 aaPredicted RBP28■■■□□ 2.07
CCM2-218ENST00000541586 LHX3Q9UBR4 397 aa28■■■□□ 2.07
CCM2-218ENST00000541586 FCF1Q9Y324 198 aaKnown RBP28■■■□□ 2.07
CCM2-218ENST00000541586 LOC285095A0A1B0GVY8 99 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 INSIG1O15503 277 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 PI15O43692 258 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 ALDH1A2O94788 518 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 SLC1A5Q15758 541 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 SLC14A2Q15849 920 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 CYS1Q717R9 158 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 TMEM135Q86UB9 458 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 PBXIP1Q96AQ6 731 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 NSMCE3Q96MG7 304 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 NUDCD1Q96RS6 583 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 SCUBE2Q9NQ36 999 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 CHRAC1Q9NRG0 131 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 PSMC3IPQ9P2W1 217 aaPredicted RBP27.99■■■□□ 2.07
CCM2-218ENST00000541586 SOX13Q9UN79 622 aa27.99■■■□□ 2.07
CCM2-218ENST00000541586 FAM237BA0A1B0GVD1 139 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 KLF8O95600 359 aaPredicted RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 CES1P23141 567 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 IL12RB1P42701 662 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 SERPINH1P50454 418 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 MRPS21P82921 87 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 POU6F1Q14863 301 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 RASA2Q15283 850 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 SPANXN3Q5MJ09 141 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 CWF19L1Q69YN2 538 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 SERPINA13PQ6UXR4 307 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 UNC5BQ8IZJ1 945 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 IL17RCQ8NAC3 791 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 MRGPRX3Q96LB0 322 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 FCRL3Q96P31 734 aaPredicted RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 SMYD2Q9NRG4 433 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 CXorf49A8MYA2 514 aaPredicted RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 RRP9O43818 475 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 USP1O94782 785 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 SRPRAP08240 638 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 HLA-EP13747 358 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 MSH2P43246 934 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 RHOAP61586 193 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 CDK18Q07002 472 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 NSUN2Q08J23 767 aaKnown RBP eCLIP27.98■■■□□ 2.07
CCM2-218ENST00000541586 TMED2Q15363 201 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 PCID2Q5JVF3 399 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 SDE2Q6IQ49 451 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 TXNDC5Q8NBS9 432 aaKnown RBP27.98■■■□□ 2.07
CCM2-218ENST00000541586 IFT43Q96FT9 208 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 FEM1CQ96JP0 617 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 KIFC1Q9BW19 673 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 OSBPL6Q9BZF3 934 aa27.98■■■□□ 2.07
CCM2-218ENST00000541586 FAM159BA6NKW6 160 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 TTC34A8MYJ7 566 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 SMAD6O43541 496 aaKnown RBP27.97■■■□□ 2.07
CCM2-218ENST00000541586 ATXN1LP0C7T5 689 aaKnown RBP27.97■■■□□ 2.07
CCM2-218ENST00000541586 HNRNPLP14866 589 aaKnown RBP eCLIP27.97■■■□□ 2.071e-7■□□□□ 10.3
CCM2-218ENST00000541586 NR1D1P20393 614 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 ANKRD20A4Q4UJ75 823 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 SIRPB2Q5JXA9 342 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 PKN3Q6P5Z2 889 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 ADGRD1Q6QNK2 874 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 SYNPOQ8N3V7 929 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 DCAKDQ8WVC6 231 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 SLC44A1Q8WWI5 657 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms