RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SPC25Q9HBM1 224 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CHST12Q9NRB3 414 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 NSMCE4AQ9NXX6 385 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 FBXW11Q9UKB1 542 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CNOT6Q9ULM6 557 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 UBQLN1Q9UMX0 589 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 GMEB1Q9Y692 573 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MYLKQ15746 1914 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 TCRBV3S1A0A5B6 114 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ZNF839A8K0R7 811 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 H0YJX3 145 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SOCS2O14508 198 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 AURKAO14965 403 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 UBDO15205 165 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 HUS1O60921 280 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ADAMTS4O75173 837 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ARNTP27540 789 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC7A1P30825 629 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC1A2P43004 574 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 STT3AP46977 705 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PRAMEP78395 509 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CSHL1Q14406 222 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 LPIN1Q14693 890 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 C6orf10Q5SRN2 563 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 KLHL35Q6PF15 583 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 POTEHQ6S545 545 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ZBTB49Q6ZSB9 765 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 KDELC2Q7Z4H8 507 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PNPLA1Q8N8W4 532 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 OR9I1Q8NGQ6 314 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 DIS3LQ8TF46 1054 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 TNIP3Q96KP6 325 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 DDIT4Q9NX09 232 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CHCHD3Q9NX63 227 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 GDAP2Q9NXN4 497 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 RAD54BQ9Y620 910 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MRPL42Q9Y6G3 142 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MRASO14807 208 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 MTSS1O43312 755 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 F2P00734 622 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 NCAM1P13591 858 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 ARCN1P48444 511 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 TAF6P49848 677 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PLK1P53350 603 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PRKCQQ04759 706 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 SQLEQ14534 574 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PRPSAP1Q14558 356 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PCID2Q5JVF3 399 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 LHX8Q68G74 356 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 DUS1LQ6P1R4 473 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 GPRIN1Q7Z2K8 1008 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PIWIL4Q7Z3Z4 852 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 FAM47BQ8NA70 645 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 IPMKQ8NFU5 416 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 SNRNP27Q8WVK2 155 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 EDEM1Q92611 657 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 FAM210AQ96ND0 272 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 OSMRQ99650 979 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 TBL1YQ9BQ87 522 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 MRPL57Q9BQC6 102 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 ADAMTS10Q9H324 1103 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 SPAG4Q9NPE6 437 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 PNPLA3Q9NST1 481 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 DUS2Q9NX74 493 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 SFMBT1Q9UHJ3 866 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 SARDHQ9UL12 918 aa10.6□□□□□ -0.71
PHACTR3-209ENST00000541461 GPC4O75487 556 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CD4P01730 458 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ASGR1P07306 291 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SNRPB2P08579 225 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 GNAO1P09471 354 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 ATP5F1P24539 256 aaPredicted RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 YWHAQP27348 245 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 HCAR3P49019 387 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SCAPQ12770 1279 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 TRAP1Q12931 704 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 MFSD10Q14728 455 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 KCNA10Q16322 511 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 UGP2Q16851 508 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 RBM20Q5T481 1227 aaKnown RBP10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CNTN4Q8IWV2 1026 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 FIBCD1Q8N539 461 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 CANT1Q8WVQ1 401 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 KCTD13Q8WZ19 329 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 TOP1MTQ969P6 601 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 NTAN1Q96AB6 310 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 PHF21BQ96EK2 531 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC9A7Q96T83 725 aa10.59□□□□□ -0.71
PHACTR3-209ENST00000541461 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms