RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TSGA10Q9BZW7 698 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 POLR1EQ9GZS1 481 aaKnown RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 GDF3Q9NR23 364 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 TM7SF3Q9NS93 570 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 SEPT10Q9P0V9 454 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 AMFRQ9UKV5 643 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 GUCA1BQ9UMX6 200 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ATP8A1Q9Y2Q0 1164 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 DMXL1Q9Y485 3027 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 CEP192Q8TEP8 1941 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 A6NNZ2 444 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 A8MX80 341 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 RAD51BO15315 384 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 HTRA2O43464 458 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 KRT86O43790 486 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 NRDCO43847 1150 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 MAGEC1O60732 1142 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 TM7SF2O76062 418 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CPP00450 1065 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 HLA-DQB2P05538 268 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 C6P13671 934 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CD59P13987 128 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 TGM2P21980 687 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CTNNA2P26232 953 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 MMP12P39900 470 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 NR2C2P49116 596 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 LIG3P49916 1009 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PEX5P50542 639 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 NOVA1P51513 510 aaKnown RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 RWDD2BP57060 319 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CCZ1BP86790 482 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 OVGP1Q12889 678 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 TRAF2Q12933 501 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 ZBTB17Q13105 803 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 SLC14A1Q13336 389 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PPP2R5EQ16537 467 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 TMEM52BQ4KMG9 183 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PPM1JQ5JR12 505 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 RALGPS1Q5JS13 557 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 FAM182AQ5T1J6 154 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC181Q5TID7 509 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 GCNT7Q6ZNI0 430 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 Q6ZSR6 202 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 BZW1Q7L1Q6 419 aaKnown RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PTAR1Q7Z6K3 402 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 ZC3H18Q86VM9 953 aaKnown RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 UBL4BQ8N7F7 174 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 OR13H1Q8NG92 308 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 TFB1MQ8WVM0 346 aaKnown RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 AGAP3Q96P47 875 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 ELF4Q99607 663 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 KLF6Q99612 283 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 C1QTNF7Q9BXJ2 289 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 BRD8Q9H0E9 1235 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 AMACRQ9UHK6 382 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PACSIN2Q9UNF0 486 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-215ENST00000540904 COQ6Q9Y2Z9 468 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 RAI2Q9Y5P3 530 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 CAPN6Q9Y6Q1 641 aa9.29□□□□□ -0.92
SNHG1-215ENST00000540904 PCDH15Q96QU1 1955 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 A0A1W2PQ67 120 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 POM121BA6NF01 834 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 MIF4GDA9UHW6 222 aaKnown RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 FPGTO14772 594 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 GIPC1O14908 333 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 SH3BP5O60239 455 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 DFNA5O60443 496 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 PGLSO95336 258 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 PDHA1P08559 390 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC175P0C221 793 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ELFN1P0C7U0 828 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 THEGLP0DJG4 465 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 PYGMP11217 842 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 CETN2P41208 172 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 CCT8P50990 548 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 COPS2P61201 443 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 IFI35P80217 286 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 NIPAL4Q0D2K0 466 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 RALGDSQ12967 914 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ZNF211Q13398 564 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 PRKD1Q15139 912 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ARMC12Q5T9G4 340 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 AADACL2Q6P093 401 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 KDM7AQ6ZMT4 941 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 BBS12Q6ZW61 710 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 SPATS2Q86XZ4 545 aaKnown RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 NAXDQ8IW45 347 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 RNF10Q8N5U6 811 aaKnown RBP9.28□□□□□ -0.92
SNHG1-215ENST00000540904 CNTD1Q8N815 330 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 DEFB124Q8NES8 71 aa9.28□□□□□ -0.92
SNHG1-215ENST00000540904 ARRDC2Q8TBH0 407 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms