RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RFWD3Q6PCD5 774 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CRTC1Q6UUV9 634 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 GCNT7Q6ZNI0 430 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC73Q6ZRK6 1079 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 Q6ZSR6 202 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 EPM2AIP1Q7L775 607 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 BHLHA9Q7RTU4 235 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TMC3Q7Z5M5 1100 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 VASH2Q86V25 355 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PARGQ86W56 976 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 HORMAD1Q86X24 394 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TICAM1Q8IUC6 712 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC117Q8IWD4 279 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 UNC45BQ8IWX7 931 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 C12orf56Q8IXR9 622 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SLC22A18ASQ8N1D0 253 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 HJURPQ8NCD3 748 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PARD3BQ8TEW8 1205 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 FRS2Q8WU20 508 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 OR8D1Q8WZ84 308 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 UBE2FQ969M7 185 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 AZIN2Q96A70 460 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TMEM159Q96B96 161 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 EPSTI1Q96J88 318 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TBATAQ96M53 351 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TWNKQ96RR1 684 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 DDX50Q9BQ39 737 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 BOCQ9BWV1 1114 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SLC12A9Q9BXP2 914 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 B3GNT4Q9C0J1 378 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CYP3A43Q9HB55 503 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 EPB41L5Q9HCM4 733 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 GPR27Q9NS67 375 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SEMA3GQ9NS98 782 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 DNAJC28Q9NX36 388 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CGNQ9P2M7 1197 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SFMBT1Q9UHJ3 866 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ADGRE2Q9UHX3 823 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PLAAQ9Y263 795 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 HS3ST3A1Q9Y663 406 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 GOLGA6L7A0A1B0GV03 622 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 A6NNZ2 444 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 LRRIQ3A6PVS8 624 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 B2RBV5 119 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 D6RAR5 112 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 MCF2LO15068 1137 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 MUSKO15146 869 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CLIC2O15247 247 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SHOXO15266 292 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 ALOX15BO15296 676 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 EXOC3O60645 756 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 AGFG2O95081 481 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 ASS1P00966 412 aaKnown RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 IGLV3-27P01718 113 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 PRNPP04156 253 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 TNFRSF8P28908 595 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SLC6A4P31645 630 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CCKBRP32239 447 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 RABIFP47224 123 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CASP4P49662 377 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CLCN7P51798 805 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SLC8A3P57103 927 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CLDN2P57739 230 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 TAS2R38P59533 333 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 RNF4P78317 190 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SULT2A1Q06520 285 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 IKZF1Q13422 519 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SLC12A1Q13621 1099 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CDH18Q13634 790 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 FZD2Q14332 565 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 DRAP1Q14919 205 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 DEFB133Q30KQ1 61 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 ZACNQ401N2 412 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 FSCBQ5H9T9 825 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 FHL5Q5TD97 284 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 BSPRYQ5W0U4 402 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 MSANTD2Q6P1R3 559 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 KYAT3Q6YP21 454 aaKnown RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 MMS22LQ6ZRQ5 1243 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 B3GNT8Q7Z7M8 397 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 PIGZQ86VD9 579 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 ZFAND4Q86XD8 727 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SLC35F3Q8IY50 421 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CARNMT1Q8N4J0 409 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 C19orf47Q8N9M1 422 aaKnown RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 C9orf43Q8TAL5 461 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 PLEKHO2Q8TD55 490 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 LMX1AQ8TE12 382 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 BTN2A2Q8WVV5 523 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 KLHL6Q8WZ60 621 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 COX4I2Q96KJ9 171 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 RPL10LQ96L21 214 aaKnown RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 BMFQ96LC9 184 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 DHRS1Q96LJ7 313 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 PRICKLE1Q96MT3 831 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 CATSPER2Q96P56 530 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 NOX5Q96PH1 765 aa4.71□□□□□ -1.66
SNHG1-214ENST00000540865 GFM1Q96RP9 751 aaKnown RBP4.71□□□□□ -1.66
SNHG1-214ENST00000540865 IL12RB2Q99665 862 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms