RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IRGQ	Q8WZA9	623 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATP6V1E2	Q96A05	226 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C8orf48	Q96LL4	319 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HNRNPAB	Q99729	332 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NPAS2	Q99743	824 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NUF2	Q9BZD4	464 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PCDHAC1	Q9H158	963 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C6orf203	Q9P0P8	240 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RIMS3	Q9UJD0	308 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TSPAN16	Q9UKR8	245 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RNF11	Q9Y3C5	154 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GMEB1	Q9Y692	573 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SYNJ2BP-COX16	A0A087WUM0	186 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DDHD2	O94830	711 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SEC24D	O94855	1032 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LTF	P02788	710 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ITGB1	P05556	798 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PSMC3	P17980	439 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IL4R	P24394	825 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MGAT1	P26572	445 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	VARS	P26640	1264 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HOXA9	P31269	272 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAPK10	P53779	464 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATXN1	P54253	815 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NR1H2	P55055	460 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IRF9	Q00978	393 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TAZ	Q16635	292 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC44A4	Q53GD3	710 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IL23R	Q5VWK5	629 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PACS1	Q6VY07	963 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AHI1	Q8N157	1196 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KY	Q8NBH2	561 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GIPC3	Q8TF64	312 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GIPC2	Q8TF65	315 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KBTBD7	Q8WVZ9	684 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CLP1	Q92989	425 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATP2A3	Q93084	1043 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC4A5	Q9BY07	1137 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DUSP16	Q9BY84	665 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COQ10B	Q9H8M1	238 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BRD9	Q9H8M2	597 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PFDN4	Q9NQP4	134 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADA2	Q9NZK5	511 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COX16	Q9P0S2	106 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EPS15L1	Q9UBC2	864 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COPG2	Q9UBF2	871 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RSL24D1	Q9UHA3	163 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF232	Q9UNY5	417 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FIS1	Q9Y3D6	152 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	INSL5	Q9Y5Q6	135 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC12A8	A0AV02	714 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783		M0QZQ0	153 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	APOL1	O14791	398 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCL16	O15467	120 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADH1C	P00326	375 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TFE3	P19532	575 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ASPA	P45381	313 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MNX1	P50219	401 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NDST2	P52849	883 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TFDP2	Q14188	446 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XKR4	Q5GH76	650 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMC5	Q6UXY8	1006 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CYP2R1	Q6VVX0	501 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CRYBG2	Q8N1P7	616 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EFHB	Q8N7U6	833 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAFA	Q8NHW3	353 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RTKN	Q9BST9	563 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRKD2	Q9BZL6	878 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARMC7	Q9H6L4	198 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF696	Q9H7X3	374 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TCF7L2	Q9NQB0	619 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C20orf96	Q9NUD7	363 aa	Predicted RBP	5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DNAJC28	Q9NX36	388 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SEPT10	Q9P0V9	454 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TXNDC16	Q9P2K2	825 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CIDEB	Q9UHD4	219 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RAB26	Q9ULW5	256 aa		5.71	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CUL9	Q8IWT3	2517 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOBP	A7XYQ1	873 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GOLGA8T	H3BQL2	631 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TEX28	O15482	410 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GLRA3	O75311	464 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CILP	O75339	1184 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MICAL2	O94851	1124 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NCAM1	P13591	858 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZFX	P17010	805 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PBX3	P40426	434 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SULT1E1	P49888	294 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SERPINB9	P50453	376 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MPP3	Q13368	585 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ART3	Q13508	389 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF423	Q2M1K9	1284 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TCEAL5	Q5H9L2	206 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FSCB	Q5H9T9	825 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POTEH	Q6S545	545 aa		5.71	□□□□□ -1.5

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