RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 EBAG9O00559 213 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 PCNAP12004 261 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 STX2P32856 288 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 GRK6P43250 576 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 ZNF132P52740 706 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 ARL16Q0P5N6 197 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 BIRC2Q13490 618 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 NEDD9Q14511 834 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 SETMARQ53H47 684 aaPredicted RBP3.7□□□□□ -1.82
MDM2-227ENST00000540709 PAPPA-AS1Q5QFB9 102 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 WDR73Q6P4I2 378 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 B3GNT6Q6ZMB0 384 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 TUBA1AQ71U36 451 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 ZNF771Q7L3S4 317 aaPredicted RBP3.7□□□□□ -1.82
MDM2-227ENST00000540709 SFR1Q86XK3 245 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 RUFY2Q8WXA3 655 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 FEM1CQ96JP0 617 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 EYA3Q99504 573 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 TUBA1CQ9BQE3 449 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 SMARCAL1Q9NZC9 954 aa3.7□□□□□ -1.82
MDM2-227ENST00000540709 ATXN2Q99700 1313 aaKnown RBP3.7□□□□□ -1.82
MDM2-227ENST00000540709 FAM90A7PA6NKC0 464 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 FAM90A22PA8MWA6 464 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 FAM90A12PA8MX19 464 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 FAM90A23PA8MXZ1 464 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 SOCS6O14544 535 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 TIPRLO75663 272 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 LDHAP00338 332 aaKnown RBP3.69□□□□□ -1.82
MDM2-227ENST00000540709 CRYAAP02489 173 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 ATP1A1P05023 1023 aaKnown RBP3.69□□□□□ -1.82
MDM2-227ENST00000540709 SP1P08047 785 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 PTPN2P17706 415 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 EDN2P20800 178 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 RYKP34925 604 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 CLCN3P51790 818 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 NR1H2P55055 460 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 CLDN2P57739 230 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 TBL3Q12788 808 aaKnown RBP3.69□□□□□ -1.82
MDM2-227ENST00000540709 TNFAIP1Q13829 316 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 FAM69BQ5VUD6 431 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 IRAK1BP1Q5VVH5 260 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 SLC22A25Q6T423 547 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 GSG1LQ6UXU4 331 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 FAM160B2Q86V87 743 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 HERC6Q8IVU3 1022 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 NAGSQ8N159 534 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 ZNF441Q8N8Z8 693 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 SPATA5Q8NB90 893 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 LRRC8CQ8TDW0 803 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 RND1Q92730 232 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 TANKQ92844 425 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 TMEM19Q96HH6 336 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 BBS4Q96RK4 519 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 RPS6KC1Q96S38 1066 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 ARPC5LQ9BPX5 153 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 PYM1Q9BRP8 204 aaKnown RBP3.69□□□□□ -1.82
MDM2-227ENST00000540709 TAOK3Q9H2K8 898 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 PTPRHQ9HD43 1115 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 SNTG1Q9NSN8 517 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 SIX4Q9UIU6 781 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 RCOR1Q9UKL0 485 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 A3GALT2U3KPV4 340 aa3.69□□□□□ -1.82
MDM2-227ENST00000540709 GAGE7O76087 117 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 NDUFB4O95168 129 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 CNPP09543 421 aaKnown RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 GAGE12FP0CL80 117 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 GAGE12GP0CL81 117 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 GAGE12IP0CL82 117 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 POU1F1P28069 291 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 BLKP51451 505 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 ARL4CP56559 192 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 ZNF155Q12901 538 aaPredicted RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 GAGE1Q13065 139 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 GAGE4Q13068 117 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 ZBTB17Q13105 803 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 KRT72Q14CN4 511 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 RBBP5Q15291 538 aaKnown RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 NFIL3Q16649 462 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 KRTAP24-1Q3LI83 254 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 AMZ1Q400G9 498 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 MMEL1Q495T6 779 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 C17orf99Q6UX52 265 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 MEX3BQ6ZN04 569 aaKnown RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 TRMT1LQ7Z2T5 733 aaKnown RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 IL17RCQ8NAC3 791 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 OR13A1Q8NGR1 328 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 FIG4Q92562 907 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 REEP2Q9BRK0 252 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 MXRA8Q9BRK3 442 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 SPRY4Q9C004 299 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 TTYH1Q9H313 450 aaPredicted RBP3.68□□□□□ -1.82
MDM2-227ENST00000540709 SMYD2Q9NRG4 433 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 RASSF1Q9NS23 344 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 ZNF224Q9NZL3 707 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 PSAT1Q9Y617 370 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 COMMD10Q9Y6G5 202 aa3.68□□□□□ -1.82
MDM2-227ENST00000540709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 CBY3A6NI87 242 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms