RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZFC3H1O60293 1989 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 IGSF10Q6WRI0 2623 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 TMEM110-MUSTN1A8MSY1 372 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 K7ESM1 405 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 TOR1BO14657 336 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 AQP9O43315 295 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 GYPCP04921 128 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CYP1A2P05177 515 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CKMT1AP12532 417 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 C6P13671 934 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CTSEP14091 401 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 TCF4P15884 667 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 HTR1BP28222 390 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 IGFALSP35858 605 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 GJC1P36383 396 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 RGRP47804 291 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CSNK1DP48730 415 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 LIG3P49916 1009 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ADKP55263 362 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 CDH6P55285 790 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 PFN3P60673 137 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 PPARDQ03181 441 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 SLC10A7Q0GE19 358 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 EIF2B5Q13144 721 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 C1orf61Q13536 156 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 DPYSQ14117 519 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ZNF235Q14590 738 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 INPP5AQ14642 412 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 DPYSL2Q16555 572 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 DEFB133Q30KQ1 61 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 PRRT3Q5FWE3 981 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 TPRG1LQ5T0D9 272 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 C19orf48Q6RUI8 117 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ENPP7Q6UWV6 458 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 RD3Q7Z3Z2 195 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ARHGAP12Q8IWW6 846 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 TP53INP2Q8IXH6 220 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CACTIN-AS1Q8N1I8 211 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ZNF548Q8NEK5 533 aaPredicted RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 PDCD6IPQ8WUM4 868 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 HNRNPLLQ8WVV9 542 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 RFFLQ8WZ73 363 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 GLMNQ92990 594 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 XPO4Q9C0E2 1151 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 DEF6Q9H4E7 631 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 ZNHIT6Q9NWK9 470 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 CTTNBP2NLQ9P2B4 639 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 APOBEC3BQ9UH17 382 aaKnown RBP9.08□□□□□ -0.96
LMO3-222ENST00000540445 ATP8A1Q9Y2Q0 1164 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 RAXQ9Y2V3 346 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 CSNK1G3Q9Y6M4 447 aa9.08□□□□□ -0.96
LMO3-222ENST00000540445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 CPED1A4D0V7 1026 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 CBFA2T2O43439 604 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 MT-CO3P00414 261 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PCCBP05166 539 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ANXA6P08133 673 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TPM1P09493 284 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 H2AFZP0C0S5 128 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ELFN1P0C7U0 828 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 SERPINB6P35237 376 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PEX5P50542 639 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 BLKP51451 505 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 ITKQ08881 620 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 MMRN1Q13201 1228 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ACOX1Q15067 660 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 IRF4Q15306 451 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TCEA2Q15560 299 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 CDKN3Q16667 212 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 WSCD2Q2TBF2 565 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TMCO4Q5TGY1 634 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 MARC1Q5VT66 337 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TXNRD3NBQ6F5E7 133 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ZCCHC8Q6NZY4 707 aaKnown RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 H2AFVQ71UI9 128 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 HID1Q8IV36 788 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PHACTR4Q8IZ21 702 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 RBFAQ8N0V3 343 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ATPAF2Q8N5M1 289 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 NIPA2Q8N8Q9 360 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 FAM181AQ8N9Y4 354 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TP53I13Q8NBR0 393 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 KCTD6Q8NC69 237 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 OR8K1Q8NGG5 319 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ZNF564Q8TBZ8 553 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 TEKT4Q8WW24 435 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 SCG3Q8WXD2 468 aaKnown RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 CTNNBL1Q8WYA6 563 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ZNF599Q96NL3 588 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 DCBLD2Q96PD2 775 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms