RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-212ENST00000540230 LGMNQ99538 433 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 BAG1Q99933 345 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-212ENST00000540230 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 HS3ST3A1Q9Y663 406 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 A8MX80 341 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 PSTPIP1O43586 416 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 DFNA5O60443 496 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 MAGEC1O60732 1142 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 HLA-DQB2P05538 268 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 KRT10P13645 584 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 SPINK2P20155 84 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 CCNCP24863 283 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 CDKN2BP42772 138 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 RXRGP48443 463 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 LIG3P49916 1009 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 DYNLT1P63172 113 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 DSC2Q02487 901 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 FOXC1Q12948 553 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 C11orf63Q6NUN7 778 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 RFX6Q8HWS3 928 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 BBS5Q8N3I7 341 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 DENND6BQ8NEG7 585 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 PDCD6IPQ8WUM4 868 aaKnown RBP15.17■□□□□ 0.02
UBE3B-212ENST00000540230 SEMA3CQ99985 751 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 TOR4AQ9NXH8 423 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 DDX56Q9NY93 547 aaKnown RBP15.17■□□□□ 0.02
UBE3B-212ENST00000540230 IMPACTQ9P2X3 320 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 PCDHB9Q9Y5E1 797 aa15.17■□□□□ 0.02
UBE3B-212ENST00000540230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 KCNK1O00180 336 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 FPGTO14772 594 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 APOL1O14791 398 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SOCS5O75159 536 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 ITGAVP06756 1048 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 GM2AP17900 193 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 GRK6P43250 576 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 ARRB1P49407 418 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SUOXP51687 545 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 PFN3P60673 137 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 ZBTB17Q13105 803 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 IRF4Q15306 451 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 TAZQ16635 292 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 TIGD7Q6NT04 549 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 ERAP2Q6P179 960 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SLCO6A1Q86UG4 719 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 CCDC13Q8IYE1 715 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 PNPLA1Q8N8W4 532 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 CCNYQ8ND76 341 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 OLFM3Q96PB7 478 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SMIM14Q96QK8 99 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 RBM22Q9NW64 420 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 SAE1Q9UBE0 346 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 B4GALT6Q9UBX8 382 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 TRIM10Q9UDY6 481 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 PNMA8BQ9ULN7 279 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-212ENST00000540230 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
UBE3B-212ENST00000540230 GOLGA8CPA6NN73 597 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 CPP00450 1065 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 PDHA1P08559 390 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 CCNB1P14635 433 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 MX2P20592 715 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 VAV2P52735 878 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 PPIDQ08752 370 aaKnown RBP15.15■□□□□ 0.02
UBE3B-212ENST00000540230 ITKQ08881 620 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 NIPAL4Q0D2K0 466 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 FZD2Q14332 565 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 WSCD2Q2TBF2 565 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 KAZNQ674X7 775 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 LIPIQ6XZB0 460 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 DAAM2Q86T65 1068 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 OXR1Q8N573 874 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 PAF1Q8N7H5 531 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 FATE1Q969F0 183 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 POLR1EQ9GZS1 481 aaKnown RBP15.15■□□□□ 0.02
UBE3B-212ENST00000540230 UCKL1Q9NWZ5 548 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 KLF15Q9UIH9 416 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 FRYQ5TBA9 3013 aa15.15■□□□□ 0.02
UBE3B-212ENST00000540230 COL5A1P20908 1838 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-212ENST00000540230 A0A0U1RQS6 177 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 SPTY2D1-AS1A0A0U1RR47 76 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 YKT6O15498 198 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 PJA2O43164 708 aa15.14■□□□□ 0.01
UBE3B-212ENST00000540230 HYAL3O43820 417 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms