RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DPF3Q92784 378 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 FCRL5Q96RD9 977 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CIB1Q99828 191 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 NOL6Q9H6R4 1146 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 IGSF5Q9NSI5 407 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 PTCH2Q9Y6C5 1203 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 ATP5BP06576 529 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CHN2P52757 468 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 GEMP55040 296 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 FOXA1P55317 472 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 PSME3P61289 254 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 UGP2Q16851 508 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 RARS2Q5T160 578 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 MYO1HQ8N1T3 1032 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CEP70Q8NHQ1 597 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 GTF3C2Q8WUA4 911 aaPredicted RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 HBEGFQ99075 208 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CATSPERBQ9H7T0 1116 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 SLC4A7Q9Y6M7 1214 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 A0A1B0GTL3 188 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 UBDO15205 165 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 MT-ND1P03886 318 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 CKMT2P17540 419 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 ACVRL1P37023 503 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PLIN5Q00G26 463 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 MTX3Q5HYI7 312 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 HECTD2Q5U5R9 776 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
BNIP3-202ENST00000540159 GALNT15Q8N3T1 639 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 C2orf69Q8N8R5 385 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 SPPL2BQ8TCT7 592 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
BNIP3-202ENST00000540159 CENPKQ9BS16 269 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 GMIPQ9P107 970 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 AURKCQ9UQB9 309 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 hCG_2014768A0A024R1R8 64 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PRORSD1PA6NEY8 169 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PAMP19021 973 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PFKFB4Q16877 469 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 MORN1Q5T089 497 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 METTL21CQ5VZV1 264 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 RANBP10Q6VN20 620 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 IL12RB2Q99665 862 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 VCX3BQ9H321 246 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 MID2Q9UJV3 735 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 LZTS1Q9Y250 596 aa13.73□□□□□ -0.21
BNIP3-202ENST00000540159 NT5C1B-RDH14C9J2C7 533 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 UBXN8O00124 270 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 NR5A2O00482 541 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 FBP2O00757 339 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 GPR39O43194 453 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TIPRLO75663 272 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 APOA4P06727 396 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ATP5F1P24539 256 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 CTGFP29279 349 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 PGAM4Q8N0Y7 254 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 C2CD4AQ8NCU7 369 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 BHMTQ93088 406 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 MRPL57Q9BQC6 102 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ACBD6Q9BR61 282 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 KATNAL1Q9BW62 490 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 UBE2OQ9C0C9 1292 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 CSNK1G1Q9HCP0 422 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ABCC13Q9NSE7 274 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ANKRD6Q9Y2G4 727 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 PSMD12O00232 456 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TADA2AO75478 443 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 IPO13O94829 963 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 AIF1P55008 147 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 BIRC2Q13490 618 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TAF2Q6P1X5 1199 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 UGT2A3Q6UWM9 527 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 RBM44Q6ZP01 1051 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 LPGAT1Q92604 370 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 PTERQ96BW5 349 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 NOL11Q9H8H0 719 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TREX1Q9NSU2 369 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TIMM22Q9Y584 194 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms